RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 AKAP3O75969 853 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 SP4Q02446 784 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 LACRTQ9GZZ8 138 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 ARHGAP20Q9P2F6 1191 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 ACTN1P12814 892 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 MAP3K9P80192 1104 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 ARID5AQ03989 594 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 RIT2Q99578 217 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 MRFAP1Q9Y605 127 aa17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 RBBP6Q7Z6E9 1792 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-212ENST00000616701 NR3C1P04150 777 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 LMNB1P20700 586 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 TMEM132BQ14DG7 1078 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 UGCGQ16739 394 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 ODR4Q5SWX8 454 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 CCDC122Q5T0U0 273 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 CCDC42Q96M95 316 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 SUFUQ9UMX1 484 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 TELO2Q9Y4R8 837 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 DOCK1Q14185 1865 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 SSC5DA1L4H1 1573 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 A0A1W2PQJ5 194 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 ADM5C9JUS6 153 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 MYO1CO00159 1063 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 ENC1O14682 589 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 ZNF263O14978 683 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 HIP1RO75146 1068 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 CYLC1P35663 651 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 EIF4A3P38919 411 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 MAP2K1Q02750 393 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 PPP2R3AQ06190 1150 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 GPC2Q8N158 579 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 BAP1Q92560 729 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 PUF60Q9UHX1 559 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 JRKLQ9Y4A0 524 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 CALUO43852 315 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 NOL4O94818 638 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 FIGNQ5HY92 759 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.335e-9■■■■■ 29.1
SEMA3B-212ENST00000616701 CALR3Q96L12 384 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 GINM1Q9NU53 330 aa17.1■□□□□ 0.33
SEMA3B-212ENST00000616701 USO1O60763 962 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 DSG3P32926 999 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 PADI6Q6TGC4 694 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 JAKMIP2Q96AA8 810 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 ARMCX3Q9UH62 379 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 TRAF3IP3Q9Y228 551 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 MACROD2A1Z1Q3 448 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 GNA14O95837 355 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 TEX35Q5T0J7 233 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 TYW1Q9NV66 732 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
SEMA3B-212ENST00000616701 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 ZMYM2Q9UBW7 1377 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 PDXKO00764 312 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 SLC9A1P19634 815 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 CYP2J2P51589 502 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 TDRD12Q587J7 1177 aaKnown RBP17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 PLA2G4FQ68DD2 849 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 DAW1Q8N136 415 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 REPS2Q8NFH8 660 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 UBXN4Q92575 508 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 FIZ1Q96SL8 496 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 TMOD4Q9NZQ9 345 aa17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-212ENST00000616701 CTAGE9A4FU28 777 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 TADA3O75528 432 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 IPO7O95373 1038 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 CCNE2O96020 404 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 P4HBP07237 508 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 BCRP11274 1271 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 GAP43P17677 238 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 HOXA7P31268 230 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 CYP2C19P33261 490 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 PDXDC1Q6P996 788 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 RDH13Q8NBN7 331 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 CXorf56Q9H5V9 222 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 GPRC5CQ9NQ84 441 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
SEMA3B-212ENST00000616701 TISP43B9A030 160 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 NPEPPSP55786 919 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms