RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 DKC1O60832 514 aaKnown RBP eCLIP35.66■■■■□ 3.3
FMR1-216ENST00000616614 CDC25AP30304 524 aa35.66■■■■□ 3.3
FMR1-216ENST00000616614 NPEPPSP55786 919 aa35.66■■■■□ 3.3
FMR1-216ENST00000616614 MTERF2Q49AM1 385 aa35.66■■■■□ 3.3
FMR1-216ENST00000616614 ARL6IP4Q66PJ3 421 aaKnown RBP35.66■■■■□ 3.3
FMR1-216ENST00000616614 RPAINQ86UA6 219 aa35.66■■■■□ 3.3
FMR1-216ENST00000616614 FAM49AQ9H0Q0 323 aaPredicted RBP35.66■■■■□ 3.3
FMR1-216ENST00000616614 WDR81Q562E7 1941 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 VWA3AA6NCI4 1184 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 LYPLA2O95372 231 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 BRD1O95696 1058 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 ACRP10323 421 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 YWHABP31946 246 aaKnown RBP35.65■■■■□ 3.3
FMR1-216ENST00000616614 BMP8BP34820 402 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 GRIN1Q05586 938 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 MBTPS1Q14703 1052 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 ECM1Q16610 540 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 POLR3CQ9BUI4 534 aaPredicted RBP35.65■■■■□ 3.3
FMR1-216ENST00000616614 OSBPL7Q9BZF2 842 aa35.65■■■■□ 3.3
FMR1-216ENST00000616614 UBE2OQ9C0C9 1292 aaKnown RBP35.65■■■■□ 3.3
FMR1-216ENST00000616614 CTSHP09668 335 aa35.64■■■■□ 3.3
FMR1-216ENST00000616614 MYH9P35579 1960 aaKnown RBP35.63■■■■□ 3.29
FMR1-216ENST00000616614 SMIM35A0A1B0GVV1 85 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 BMP15O95972 392 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 RPA1P27694 616 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 FOXD4L6Q3SYB3 417 aaPredicted RBP35.63■■■■□ 3.29
FMR1-216ENST00000616614 FOXD4L3Q6VB84 417 aaPredicted RBP35.63■■■■□ 3.29
FMR1-216ENST00000616614 KIAA0319LQ8IZA0 1049 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 ERMNQ8TAM6 284 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 MMTAG2Q9BU76 263 aaKnown RBP35.63■■■■□ 3.29
FMR1-216ENST00000616614 TUFT1Q9NNX1 390 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 CYP26B1Q9NR63 512 aa35.63■■■■□ 3.29
FMR1-216ENST00000616614 TFIP11Q9UBB9 837 aaKnown RBP35.63■■■■□ 3.29
FMR1-216ENST00000616614 CHRNA1P02708 482 aa35.62■■■■□ 3.29
FMR1-216ENST00000616614 LINC01465Q8N7H1 131 aa35.62■■■■□ 3.29
FMR1-216ENST00000616614 RSPH10B2B2RC85 870 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 NBNO60934 754 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 CAND2O75155 1236 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 RSPH10BP0C881 870 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 PPIGQ13427 754 aaKnown RBP eCLIP35.61■■■■□ 3.292e-7■■■□□ 15.1
FMR1-216ENST00000616614 FAM26DQ5JW98 314 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 POTEGQ6S5H5 508 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 DEFB128Q7Z7B8 93 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 LRRC71Q8N4P6 559 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 PIGOQ8TEQ8 1089 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 RAB34Q9BZG1 259 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 IL23AQ9NPF7 189 aa35.61■■■■□ 3.29
FMR1-216ENST00000616614 DAXXQ9UER7 740 aaPredicted RBP35.61■■■■□ 3.29
FMR1-216ENST00000616614 MAGEB2O15479 319 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 DDIT3P35638 169 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 MGAT3Q09327 533 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 TMEM62Q0P6H9 643 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 C9orf50Q5SZB4 431 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 METTL13Q8N6R0 699 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 CEP170P1Q96L14 293 aa35.6■■■■□ 3.29
FMR1-216ENST00000616614 MARCKSP29966 332 aaPredicted RBP35.59■■■■□ 3.29
FMR1-216ENST00000616614 CCT6AP40227 531 aaKnown RBP35.59■■■■□ 3.29
FMR1-216ENST00000616614 NASPP49321 788 aaPredicted RBP35.59■■■■□ 3.29
FMR1-216ENST00000616614 CLCN3P51790 818 aa35.59■■■■□ 3.29
FMR1-216ENST00000616614 TBC1D8BQ0IIM8 1120 aa35.59■■■■□ 3.29
FMR1-216ENST00000616614 MKRN4PQ13434 485 aaPredicted RBP35.59■■■■□ 3.29
FMR1-216ENST00000616614 DRP2Q13474 957 aa35.59■■■■□ 3.29
FMR1-216ENST00000616614 EFCAB12Q6NXP0 572 aa35.59■■■■□ 3.29
FMR1-216ENST00000616614 SNX29Q8TEQ0 813 aa35.59■■■■□ 3.29
FMR1-216ENST00000616614 IGKV6-21A0A0C4DH24 114 aa35.58■■■■□ 3.29
FMR1-216ENST00000616614 OTUD6AQ7L8S5 288 aa35.58■■■■□ 3.29
FMR1-216ENST00000616614 BUD13Q9BRD0 619 aaKnown RBP eCLIP35.58■■■■□ 3.29
FMR1-216ENST00000616614 FBXO2Q9UK22 296 aaPredicted RBP35.58■■■■□ 3.29
FMR1-216ENST00000616614 KAT6AQ92794 2004 aa35.58■■■■□ 3.29
FMR1-216ENST00000616614 MAFO75444 373 aaPredicted RBP35.57■■■■□ 3.29
FMR1-216ENST00000616614 RFC2P35250 354 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 SLC39A14Q15043 492 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 SHHQ15465 462 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 XKR9Q5GH70 373 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 TMEM240Q5SV17 173 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 HAUS3Q68CZ6 603 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 ZNF365Q70YC5 407 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 RSPH3Q86UC2 560 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 SUGCTQ9HAC7 445 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 ANKEF1Q9NU02 776 aa35.57■■■■□ 3.29
FMR1-216ENST00000616614 MRPS6P82932 125 aaKnown RBP35.57■■■■□ 3.28
FMR1-216ENST00000616614 CHAMP1Q96JM3 812 aa35.57■■■■□ 3.28
FMR1-216ENST00000616614 ZNF396Q96N95 335 aaPredicted RBP35.57■■■■□ 3.28
FMR1-216ENST00000616614 CDY2AQ9Y6F7 541 aa35.57■■■■□ 3.28
FMR1-216ENST00000616614 CXCL10P02778 98 aa35.56■■■■□ 3.28
FMR1-216ENST00000616614 RARRES1P49788 294 aa35.56■■■■□ 3.28
FMR1-216ENST00000616614 TCTN1Q2MV58 587 aa35.56■■■■□ 3.28
FMR1-216ENST00000616614 KRT79Q5XKE5 535 aa35.56■■■■□ 3.28
FMR1-216ENST00000616614 NME8Q8N427 588 aa35.56■■■■□ 3.28
FMR1-216ENST00000616614 LINC00301Q8NCQ3 95 aa35.56■■■■□ 3.28
FMR1-216ENST00000616614 DHX33Q9H6R0 707 aaKnown RBP35.56■■■■□ 3.28
FMR1-216ENST00000616614 VTNP04004 478 aa35.55■■■■□ 3.28
FMR1-216ENST00000616614 XRCC6P12956 609 aaKnown RBP eCLIP35.55■■■■□ 3.28
FMR1-216ENST00000616614 RPUSD2Q8IZ73 545 aaKnown RBP35.55■■■■□ 3.28
FMR1-216ENST00000616614 CLIC6Q96NY7 704 aa35.55■■■■□ 3.28
FMR1-216ENST00000616614 NACC1Q96RE7 527 aa35.55■■■■□ 3.28
FMR1-216ENST00000616614 CDHR5Q9HBB8 845 aa35.55■■■■□ 3.28
FMR1-216ENST00000616614 BMP2KQ9NSY1 1161 aaPredicted RBP35.55■■■■□ 3.28
FMR1-216ENST00000616614 KIAA1024Q9UPX6 916 aa35.55■■■■□ 3.28
FMR1-216ENST00000616614 SRPRBQ9Y5M8 271 aaKnown RBP35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms