RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PLCG2P16885 1265 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 STAT3P40763 770 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 USP11P51784 963 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 RNASELQ05823 741 aaKnown RBP14.29□□□□□ -0.12
MSH6-214ENST00000616033 PLCB4Q15147 1175 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 KRT25Q7Z3Z0 450 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 ECT2Q9H8V3 914 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 C21orf2O43822 256 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 EVI5O60447 810 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 H2AFZP0C0S5 128 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 H2AFVQ71UI9 128 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 TRPM8Q7Z2W7 1104 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 SH3RF3Q8TEJ3 882 aaPredicted RBP14.29□□□□□ -0.12
MSH6-214ENST00000616033 MTA3Q9BTC8 594 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 HDAC9Q9UKV0 1011 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 DAAM1Q9Y4D1 1078 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 PCDHGC5Q9Y5F6 944 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 POTEB3A0JP26 581 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 POTECB2RU33 542 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 LRRN2O75325 713 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 LCA5LO95447 670 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 GNA11P29992 359 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 KCNJ1P48048 391 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 ERFP50548 548 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 DR1Q01658 176 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 LRRC63Q05C16 580 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 PLS1Q14651 629 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 CRYMQ14894 314 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 LONRF1Q17RB8 773 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 POTEBQ6S5H4 581 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 FAM47EQ6ZV65 393 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 TXNRD3Q86VQ6 643 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 CEP120Q8N960 986 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 LMBR1Q8WVP7 490 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 NAGPAQ9UK23 515 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
MSH6-214ENST00000616033 TCP11X1B4DZS4 312 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 SLC16A2P36021 539 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
MSH6-214ENST00000616033 DRP2Q13474 957 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
MSH6-214ENST00000616033 ERICH1Q86X53 443 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 RUBCNQ92622 972 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 RAD54LQ92698 747 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 AK8Q96MA6 479 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 AMFRQ9UKV5 643 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 SESN3P58005 492 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 IRX1P78414 480 aaPredicted RBP14.28□□□□□ -0.12
MSH6-214ENST00000616033 EXOC3L4Q17RC7 722 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 ETAA1Q9NY74 926 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 USP17L5A8MUK1 530 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 CETN3O15182 167 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 PMS2P54278 862 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 CYP4A11Q02928 519 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
MSH6-214ENST00000616033 XRCC4Q13426 336 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 RBBP5Q15291 538 aaKnown RBP14.28□□□□□ -0.12
MSH6-214ENST00000616033 ERFEQ4G0M1 354 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 C18orf8Q96DM3 657 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 ATP6V0A4Q9HBG4 840 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 PPP1R9AQ9ULJ8 1098 aa14.28□□□□□ -0.12
MSH6-214ENST00000616033 UCHL3P15374 230 aa14.27□□□□□ -0.12
MSH6-214ENST00000616033 GNAQP50148 359 aa14.27□□□□□ -0.12
MSH6-214ENST00000616033 NEK9Q8TD19 979 aa14.27□□□□□ -0.12
MSH6-214ENST00000616033 SAAL1Q96ER3 474 aa14.27□□□□□ -0.12
MSH6-214ENST00000616033 FAM129AQ9BZQ8 928 aa14.27□□□□□ -0.12
MSH6-214ENST00000616033 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.12
MSH6-214ENST00000616033 CASP5P51878 434 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 CAPRIN2Q6IMN6 1127 aaKnown RBP14.27□□□□□ -0.13
MSH6-214ENST00000616033 HOOK3Q86VS8 718 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 SCFD2Q8WU76 684 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 PBKQ96KB5 322 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 ARHGEF10LQ9HCE6 1279 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 AJAP1Q9UKB5 411 aaPredicted RBP14.27□□□□□ -0.13
MSH6-214ENST00000616033 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.27□□□□□ -0.13
MSH6-214ENST00000616033 MYH1P12882 1939 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 MYH4Q9Y623 1939 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 FLOT1O75955 427 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 CASP4P49662 377 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 GALCP54803 685 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 ERMARDQ5T6L9 678 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 ZNF746Q6NUN9 644 aaPredicted RBP14.27□□□□□ -0.13
MSH6-214ENST00000616033 RAB34Q9BZG1 259 aa14.27□□□□□ -0.13
MSH6-214ENST00000616033 ARMCX3Q9UH62 379 aaPredicted RBP14.27□□□□□ -0.13
MSH6-214ENST00000616033 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 LRP6O75581 1613 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 PPIP5K2O43314 1243 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 MGRN1O60291 552 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 HIBADHP31937 336 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 GRM4Q14833 912 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms