RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 USP17L24Q0WX57 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 ZNF699Q32M78 642 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 FAM117BQ6P1L5 589 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L6PQ6QN14 398 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 CUEDC2Q9H467 287 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 PCDHA13Q9Y5I0 950 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 CCDC195A0A1B0GUA6 201 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 POTEMA6NI47 508 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 CCT5P48643 541 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 KLC3Q6P597 504 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 PTPRTO14522 1441 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 H3BRJ5 948 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 SNX2O60749 519 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 VCPP55072 806 aaKnown RBP20.08■□□□□ 0.8
GABPB1-212ENST00000615671 SEPT2Q15019 361 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 ZSCAN26Q16670 478 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 TRIM59Q8IWR1 403 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.8
GABPB1-212ENST00000615671 AFF2P51816 1311 aa20.08■□□□□ 0.8
GABPB1-212ENST00000615671 MYBP10242 640 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 KIAA1755Q5JYT7 1200 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 HIPK4Q8NE63 616 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 MAP4K1Q92918 833 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 SPATA33Q96N06 139 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 COG4Q9H9E3 785 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ZNF302Q9NR11 478 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 EXOC1LA0A1B0GW35 172 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 HUS1O60921 280 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ACSL3O95573 720 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ANKRD20A4Q4UJ75 823 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ANKRD20A8PQ5CZ79 823 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ANKRD20A2Q5SQ80 823 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ANKRD20A1Q5TYW2 823 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 SLC44A5Q8NCS7 719 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 DYDC2Q96IM9 177 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 IFT88Q13099 833 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 PAGE5Q96GU1 130 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 PYCARDQ9ULZ3 195 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 USP17L10C9JJH3 530 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 DDX53Q86TM3 631 aaKnown RBP20.07■□□□□ 0.8
GABPB1-212ENST00000615671 YAF2Q8IY57 180 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 RAET1EQ8TD07 263 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 WDR48Q8TAF3 677 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 MORC4Q8TE76 937 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 FAN1Q9Y2M0 1017 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 METP08581 1390 aa20.07■□□□□ 0.8
GABPB1-212ENST00000615671 ARHGDIAP52565 204 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 HDLBPQ00341 1268 aaKnown RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 FKBP3Q00688 224 aaKnown RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 KIF23Q02241 960 aaPredicted RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 DHX9Q08211 1270 aaKnown RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 TMEM179Q6ZVK1 233 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 GSDMAQ96QA5 445 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 POLR3EQ9NVU0 708 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 BSDC1Q9NW68 430 aaPredicted RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 SCAF8Q9UPN6 1271 aaKnown RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 PGRMC1O00264 195 aaKnown RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 CASP1P29466 404 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 STAT3P40763 770 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 PYROXD1Q8WU10 500 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 SH3KBP1Q96B97 665 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 CFAP69A5D8W1 941 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 M0QYV0 167 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 ATP6V1E1P36543 226 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 SUN1O94901 812 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 ANP32DO95626 131 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 SPP2Q13103 211 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 SPZ1Q9BXG8 430 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 ELP3Q9H9T3 547 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 HOXC10Q9NYD6 342 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 FAF1Q9UNN5 650 aaPredicted RBP20.06■□□□□ 0.8
GABPB1-212ENST00000615671 ADAMTS12P58397 1594 aa20.06■□□□□ 0.8
GABPB1-212ENST00000615671 ASNSP08243 561 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 PRDX5P30044 214 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 TMEM270Q6UE05 265 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 GPSM2P81274 684 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 LBRQ14739 615 aaKnown RBP20.05■□□□□ 0.8
GABPB1-212ENST00000615671 GLYCTKQ8IVS8 523 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 GJB4Q9NTQ9 266 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 CHEK2O96017 543 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 GCLMP48507 274 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 AP1B1Q10567 949 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 MFSD14CQ5VZR4 134 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 NR1H4Q96RI1 486 aaPredicted RBP20.05■□□□□ 0.8
GABPB1-212ENST00000615671 PCSK1NQ9UHG2 260 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 IMPG1Q17R60 797 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 SIK2Q9H0K1 926 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 PRPF4O43172 522 aaKnown RBP eCLIP20.05■□□□□ 0.84e-7■■□□□ 12.4
GABPB1-212ENST00000615671 SERPING1P05155 500 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 SURF1Q15526 300 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 RNF135Q8IUD6 432 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 RGS12O14924 1447 aa20.05■□□□□ 0.8
GABPB1-212ENST00000615671 MAPK6Q16659 721 aa20.04■□□□□ 0.8
GABPB1-212ENST00000615671 PRPF3O43395 683 aaKnown RBP20.04■□□□□ 0.8
GABPB1-212ENST00000615671 MCAMP43121 646 aa20.04■□□□□ 0.8
GABPB1-212ENST00000615671 PHKA2P46019 1235 aa20.04■□□□□ 0.8
GABPB1-212ENST00000615671 KPNA2P52292 529 aaKnown RBP20.04■□□□□ 0.8
GABPB1-212ENST00000615671 SPON2Q9BUD6 331 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms