RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DAAM1Q9Y4D1 1078 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZCCHC18P0CG32 403 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 FGFR4P22455 802 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 CACNA2D1P54289 1103 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 MAN2A1Q16706 1144 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 FIGNQ5HY92 759 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 MAGEB6Q8N7X4 407 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 MIPOL1Q8TD10 442 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ABTB1Q969K4 478 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 TLCD1Q96CP7 247 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 IQCDQ96DY2 449 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ISCA1Q9BUE6 129 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 DNAAF2Q9NVR5 837 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 HAO1Q9UJM8 370 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 GNPATO15228 680 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ENTPD5O75356 428 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 FGFR1OPO95684 399 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ABCD1P33897 745 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 MCAMP43121 646 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 MMP13P45452 471 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 METTL13Q8N6R0 699 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 MIGA1Q8NAN2 632 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 CTTNBP2NLQ9P2B4 639 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 CCDC188H7C350 402 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 SERPING1P05155 500 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 PCCAP05165 728 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 LONP1P36776 959 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 CTSWP56202 376 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 IFIT1BQ5T764 474 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 TTLL11Q8NHH1 800 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 GLG1Q92896 1179 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 ERP27Q96DN0 273 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 DDX50Q9BQ39 737 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
TNFAIP3-208ENST00000615468 TNKSO95271 1327 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 COQ9O75208 318 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 ASIC2Q16515 512 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 IL17AQ16552 155 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 FAM83BQ5T0W9 1011 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 TTC8Q8TAM2 541 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 DTX3LQ8TDB6 740 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 PREBQ9HCU5 417 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 PIH1D3Q9NQM4 214 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 MTRF1LQ9UGC7 380 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 LRRC42Q9Y546 428 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 TRAF5O00463 557 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 RHOBTB3O94955 611 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 DESP17661 470 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 ERFP50548 548 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 LBRQ14739 615 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 TRIM42Q8IWZ5 723 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 BICD1Q96G01 975 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 DYDC2Q96IM9 177 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 RMDN2Q96LZ7 410 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 ANKRD27Q96NW4 1050 aa11.21□□□□□ -0.61
TNFAIP3-208ENST00000615468 SSU72P8A0A1W2PR75 194 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 TMEM120BA0PK00 339 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 ATP9AO75110 1047 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 PHKA1P46020 1223 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 DR1Q01658 176 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 LRRC41Q15345 812 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 NCAPG2Q86XI2 1143 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 NAP1L3Q99457 506 aaPredicted RBP11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 PABPC3Q9H361 631 aaKnown RBP11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 SEMA4AQ9H3S1 761 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 CYP39A1Q9NYL5 469 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 STOML1Q9UBI4 398 aa11.21□□□□□ -0.62
TNFAIP3-208ENST00000615468 AGTP01019 485 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 IMPDH2P12268 514 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 ETS2P15036 469 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 HNRNPH3P31942 346 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 PLEKHG4BQ96PX9 1271 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 TBK1Q9UHD2 729 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 SIK3Q9Y2K2 1263 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 MYL1P05976 194 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 TPBGLP0DKB5 382 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 CNNM4Q6P4Q7 775 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 FBXO25Q8TCJ0 367 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 TSG101Q99816 390 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 CUEDC2Q9H467 287 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 NKIRAS1Q9NYS0 192 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 ACSL3O95573 720 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 PLCG1P19174 1290 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 EPHB2P29323 1055 aa11.2□□□□□ -0.62
TNFAIP3-208ENST00000615468 USP11P51784 963 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms