RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 VGLL4Q14135 290 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 LRRC71Q8N4P6 559 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 P2RX7Q99572 595 aaKnown RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 NACA2Q9H009 215 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 PRKAG2Q9UGJ0 569 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 ARMCX3Q9UH62 379 aaPredicted RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 TTLL3Q9Y4R7 772 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 ITGB4P16144 1822 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 BUB1BO60566 1050 aaPredicted RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 IRAK1P51617 712 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 SBK1Q52WX2 424 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 CFAP58Q5T655 872 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 IQCEQ6IPM2 695 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 ENGASEQ8NFI3 743 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 ANKZF1Q9H8Y5 726 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 ANKRD62A6NC57 917 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 ENO4A6NNW6 628 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 CNTN2Q02246 1040 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 FAM160B1Q5W0V3 765 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 KSR1Q8IVT5 923 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 RNF34Q969K3 372 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 TMEM143Q96AN5 459 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 SAR1BQ9Y6B6 198 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 DOT1LQ8TEK3 1739 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 K7ERI5 159 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 CHUKO15111 745 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TEX33O43247 280 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TMEM191BP0C7N4 346 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 ARHGAP25P42331 645 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 PAFAH1B1P43034 410 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TOB1P50616 345 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 RHBDL3P58872 404 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 CRY2Q49AN0 593 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 GJC2Q5T442 439 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TAB3Q8N5C8 712 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 DDX12PQ92771 950 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 WDR11Q9BZH6 1224 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 POLIQ9UNA4 740 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 UTRNP46939 3433 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 XRCC5P13010 732 aaKnown RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 CPLX4Q7Z7G2 160 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 NYAP2Q9P242 653 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 USP20Q9Y2K6 914 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 ABCC6O95255 1503 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 CYP4F22Q6NT55 531 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 MIS18BP1Q6P0N0 1132 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 RSRC2Q7L4I2 434 aaKnown RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 MLKLQ8NB16 471 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 GPRC5AQ8NFJ5 357 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 KAT2BQ92831 832 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 FAM193BQ96PV7 902 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-221ENST00000612856 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 TFR2Q9UP52 801 aa11.78□□□□□ -0.52
FAM3A-221ENST00000612856 WNT7AO00755 349 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 WDR46O15213 610 aaKnown RBP11.77□□□□□ -0.52
FAM3A-221ENST00000612856 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.52
FAM3A-221ENST00000612856 C2orf54Q08AI8 447 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 PPFIA1Q13136 1202 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 GALNT17Q6IS24 598 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 NACC1Q96RE7 527 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 LXNQ9BS40 222 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 CNTRLQ7Z7A1 2325 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 MYO7AQ13402 2215 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 NUP98P52948 1817 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 ADAMTS7Q9UKP4 1686 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 TUBBP07437 444 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 CLTAP09496 248 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 CXCR5P32302 372 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 PRAMEF19Q5SWL8 479 aa11.77□□□□□ -0.52
FAM3A-221ENST00000612856 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 PDHXO00330 501 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.53
FAM3A-221ENST00000612856 CKAP4Q07065 602 aaKnown RBP11.77□□□□□ -0.53
FAM3A-221ENST00000612856 ARHGEF6Q15052 776 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 SEC23AQ15436 765 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 RPS6KC1Q96S38 1066 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 SELENOOQ9BVL4 669 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 RNF19AQ9NV58 838 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 FBXO40Q9UH90 709 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 EXOC7Q9UPT5 735 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms