RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 VPS11Q9H270 941 aa13.23□□□□□ -0.29
HLCS-207ENST00000612277 USE1Q9NZ43 259 aa13.23□□□□□ -0.29
HLCS-207ENST00000612277 ASAP2O43150 1006 aa13.23□□□□□ -0.29
HLCS-207ENST00000612277 NDUFA10O95299 355 aa13.23□□□□□ -0.29
HLCS-207ENST00000612277 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
HLCS-207ENST00000612277 PDP2Q9P2J9 529 aa13.23□□□□□ -0.29
HLCS-207ENST00000612277 DDX25Q9UHL0 483 aaKnown RBP13.23□□□□□ -0.29
HLCS-207ENST00000612277 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 FGD2Q7Z6J4 655 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 CLEC4FQ8N1N0 589 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 TEKT3Q9BXF9 490 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 CUEDC2Q9H467 287 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 EXOSC4Q9NPD3 245 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 DONSONQ9NYP3 566 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 E7EWF7 191 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 AKAP10O43572 662 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 MYO1DO94832 1006 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 CDC27P30260 824 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 INAQ16352 499 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 RBBP7Q16576 425 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 CCDC144BQ3MJ40 725 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 DNAL1Q4LDG9 190 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 NSMFQ6X4W1 530 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 DTX3LQ8TDB6 740 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 ULK4Q96C45 1275 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 ATP6V1G3Q96LB4 118 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 GFPT2O94808 682 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 TJP3O95049 919 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 HSPA9P38646 679 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 PSMC6P62333 389 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 TTC8Q8TAM2 541 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 P2RX5Q93086 422 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 HIC2Q96JB3 615 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 TM6SF1Q9BZW5 370 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 WWP1Q9H0M0 922 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 GOLGA8MH3BSY2 632 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 MTRF1O75570 445 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 UBTFL6P0CB48 400 aaPredicted RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 MAST3O60307 1309 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 EIF2S1P05198 315 aaKnown RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 GJA10Q969M2 543 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 CLMNQ96JQ2 1002 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 GCOM2Q9BZD3 368 aaPredicted RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 CASS4Q9NQ75 786 aa13.22□□□□□ -0.29
HLCS-207ENST00000612277 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.22□□□□□ -0.29
HLCS-207ENST00000612277 FGGP02679 453 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 GALNT17Q6IS24 598 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
HLCS-207ENST00000612277 CCNYL1Q8N7R7 359 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 EME1Q96AY2 570 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 EML4Q9HC35 981 aaKnown RBP13.21□□□□□ -0.29
HLCS-207ENST00000612277 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
HLCS-207ENST00000612277 RALBP11234 206 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 VSTM4Q8IW00 320 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 RSPH10B2B2RC85 870 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 COBLO75128 1261 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 ARIH2O95376 493 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 GUCA1CO95843 209 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 RSPH10BP0C881 870 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 SPATA21Q7Z572 469 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 ZBTB10Q96DT7 871 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 KDM4CQ9H3R0 1056 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 TNNQ9UQP3 1299 aa13.21□□□□□ -0.29
HLCS-207ENST00000612277 A0A1W2PQ27 194 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 A0A1W2PQ64 194 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 A0A1W2PQD8 194 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 KLHL18O94889 574 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 NR2F2P24468 414 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 ZBED6P86452 979 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 IYDQ6PHW0 289 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.3
HLCS-207ENST00000612277 ENO1P06733 434 aaKnown RBP13.21□□□□□ -0.3
HLCS-207ENST00000612277 BTKQ06187 659 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 ATAD3BQ5T9A4 648 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 TERB1Q8NA31 727 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 LRRC39Q96DD0 335 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 CEP95Q96GE4 821 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 MLXIPLQ9NP71 852 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.3
HLCS-207ENST00000612277 PIK3R2O00459 728 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 DNALI1O14645 258 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms