RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 KAT2BQ92831 832 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 DHTKD1Q96HY7 919 aaPredicted RBP11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 RMDN2Q96LZ7 410 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 TRPV5Q9NQA5 729 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 BLOC1S4Q9NUP1 217 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 PCDHA13Q9Y5I0 950 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 BICDL2A1A5D9 508 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 FTCDO95954 541 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 SLC1A4P43007 532 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 VAV2P52735 878 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 MEA1Q16626 185 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 KCTD16Q68DU8 428 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 KRT25Q7Z3Z0 450 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 B4GALNT2Q8NHY0 566 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 DDX12PQ92771 950 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 VWA3BQ502W6 1294 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 PAPD7Q5XG87 772 aaKnown RBP11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 AFAP1L1Q8TED9 768 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 PNMA5Q96PV4 448 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 ZNF287Q9HBT7 754 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 TRAF5O00463 557 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 RPS6KA5O75582 802 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 MMEP08473 750 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 MAGEA1P43355 309 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 SNAP25P60880 206 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 WDR93Q6P2C0 686 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 CNNM4Q6P4Q7 775 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 GAKO14976 1311 aa11.69□□□□□ -0.54
PCDHGC3-202ENST00000611950 EIF4BP23588 611 aaKnown RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SMARCA1P28370 1054 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 TUBB2AQ13885 445 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 CCDC40Q4G0X9 1142 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 CDCA2Q69YH5 1023 aaPredicted RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 DPP8Q6V1X1 898 aaPredicted RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 CREG2Q8IUH2 290 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 TBC1D16Q8TBP0 767 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 IFT81Q8WYA0 676 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 AK8Q96MA6 479 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 TUBB2BQ9BVA1 445 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 MKS1Q9NXB0 559 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 UNCXA6NJT0 531 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 E9PMD0 336 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 C6orf229H3BNL8 230 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 EDIL3O43854 480 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 TACC1O75410 805 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 MYCLP1P12525 358 aaPredicted RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 GNA11P29992 359 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 NOVP48745 357 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 FXNQ16595 210 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SH2D3CQ8N5H7 860 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 ACBD3Q9H3P7 528 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 BARX2Q9UMQ3 279 aaPredicted RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 DAGLAQ9Y4D2 1042 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 AGPSO00116 658 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 PDHBP11177 359 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 AKR1B1P15121 316 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SCNN1DP51172 638 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 CDR1P51861 262 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 POLR2FP61218 127 aaKnown RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 CKAP4Q07065 602 aaKnown RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 TRADDQ15628 312 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SLC30A10Q6XR72 485 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM114A1Q8IWE2 563 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SPATA4Q8NEY3 305 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 OSBPL9Q96SU4 736 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 C7orf25Q9BPX7 421 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
PCDHGC3-202ENST00000611950 A0A1B0GUA9 196 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 E2F6O75461 281 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 PLCG2P16885 1265 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 STAT3P40763 770 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 ATP1A2P50993 1020 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms