RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PLEKHG4Q58EX7 1191 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 XKR3Q5GH77 459 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 IER5Q5VY09 327 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 GBF1Q92538 1859 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 DDX11L8A8MPP1 907 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 M0QZ92 97 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 STBD1O95210 358 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 DNAJB2P25686 324 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 RABGGTBP53611 331 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 WDR5P61964 334 aaKnown RBP29.21■■■□□ 2.27
VEGFA-226ENST00000611736 IKBKEQ14164 716 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 MTERF2Q49AM1 385 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 LARP1BQ659C4 914 aaKnown RBP29.21■■■□□ 2.27
VEGFA-226ENST00000611736 KIAA0319LQ8IZA0 1049 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 DEFB123Q8N688 67 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 SEPT8Q92599 483 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 PBX4Q9BYU1 374 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 RGL1Q9NZL6 768 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 TRPV2Q9Y5S1 764 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 LOXHD1Q8IVV2 1947 aa29.21■■■□□ 2.27
VEGFA-226ENST00000611736 MICAL3Q7RTP6 2002 aa29.2■■■□□ 2.27
VEGFA-226ENST00000611736 ABHD14A-ACY1A0A1B0GW23 586 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 K7ELQ4 463 aaPredicted RBP29.2■■■□□ 2.26
VEGFA-226ENST00000611736 MAGEB2O15479 319 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 P4HBP07237 508 aaKnown RBP29.2■■■□□ 2.26
VEGFA-226ENST00000611736 CYP4A11Q02928 519 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 ORC2Q13416 577 aaPredicted RBP29.2■■■□□ 2.26
VEGFA-226ENST00000611736 LPIN1Q14693 890 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 NME8Q8N427 588 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 DYDC2Q96IM9 177 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 SLC9A7Q96T83 725 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 SH2D3AQ9BRG2 576 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 LXNQ9BS40 222 aa29.2■■■□□ 2.26
VEGFA-226ENST00000611736 OR52Z1P0C646 297 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 TOB1P50616 345 aaPredicted RBP29.19■■■□□ 2.26
VEGFA-226ENST00000611736 CLCN3P51790 818 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 CTTNQ14247 550 aaKnown RBP29.19■■■□□ 2.26
VEGFA-226ENST00000611736 ZNF697Q5TEC3 545 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 LRRC71Q8N4P6 559 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 FAM161BQ96MY7 647 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 NIFKQ9BYG3 293 aaKnown RBP29.19■■■□□ 2.26
VEGFA-226ENST00000611736 IFIH1Q9BYX4 1025 aaKnown RBP29.19■■■□□ 2.26
VEGFA-226ENST00000611736 WRAP73Q9P2S5 460 aaPredicted RBP29.19■■■□□ 2.26
VEGFA-226ENST00000611736 CHD9Q3L8U1 2897 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 MYO9BQ13459 2157 aa29.19■■■□□ 2.26
VEGFA-226ENST00000611736 DKC1O60832 514 aaKnown RBP eCLIP29.18■■■□□ 2.26
VEGFA-226ENST00000611736 DEFB103AP81534 67 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 TBC1D8BQ0IIM8 1120 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 TARBP2Q15633 366 aaKnown RBP29.18■■■□□ 2.26
VEGFA-226ENST00000611736 FBXO47Q5MNV8 452 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 PLA2G4FQ68DD2 849 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 EFCAB12Q6NXP0 572 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 TIFAQ96CG3 184 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 PPP1R16BQ96T49 567 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 EIF2AK1Q9BQI3 630 aaKnown RBP29.18■■■□□ 2.26
VEGFA-226ENST00000611736 CELF4Q9BZC1 486 aaKnown RBP29.18■■■□□ 2.26
VEGFA-226ENST00000611736 FOXD4L1Q9NU39 408 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 MSRAQ9UJ68 235 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 GINS2Q9Y248 185 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 PTPRSQ13332 1948 aa29.18■■■□□ 2.26
VEGFA-226ENST00000611736 POTEMA6NI47 508 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 EFCAB14O75071 495 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 VTNP04004 478 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 RAB30Q15771 203 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 ANO5Q75V66 913 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 SUGCTQ9HAC7 445 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 PCDHB6Q9Y5E3 794 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 CDH23Q9H251 3354 aa29.17■■■□□ 2.26
VEGFA-226ENST00000611736 TSHZ1Q6ZSZ6 1077 aa29.16■■■□□ 2.26
VEGFA-226ENST00000611736 TMCO2Q7Z6W1 182 aaPredicted RBP29.16■■■□□ 2.26
VEGFA-226ENST00000611736 TPH2Q8IWU9 490 aa29.16■■■□□ 2.26
VEGFA-226ENST00000611736 PHOSPHO2Q8TCD6 241 aa29.16■■■□□ 2.26
VEGFA-226ENST00000611736 ZSWIM4Q9H7M6 989 aa29.16■■■□□ 2.26
VEGFA-226ENST00000611736 AKT3Q9Y243 479 aa29.16■■■□□ 2.26
VEGFA-226ENST00000611736 YBX2Q9Y2T7 364 aaKnown RBP29.16■■■□□ 2.26
VEGFA-226ENST00000611736 MYOGP15173 224 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 TMOD1P28289 359 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 TECP42680 631 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.15■■■□□ 2.265e-35■■■□□ 16.9
VEGFA-226ENST00000611736 HERC6Q8IVU3 1022 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 LINC01465Q8N7H1 131 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 APBB2Q92870 758 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 SNX21Q969T3 373 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 MAP7D2Q96T17 732 aa29.15■■■□□ 2.26
VEGFA-226ENST00000611736 TTYH1Q9H313 450 aaPredicted RBP29.15■■■□□ 2.26
VEGFA-226ENST00000611736 AGO3Q9H9G7 860 aaKnown RBP29.15■■■□□ 2.26
VEGFA-226ENST00000611736 SLITRK3O94933 977 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 CD52P31358 61 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 NPEPPSP55786 919 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 KIZQ2M2Z5 673 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 C4orf19Q8IY42 314 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 C4orf32Q8N8J7 132 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 CEP89Q96ST8 783 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 NKX2-4Q9H2Z4 354 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 CDHR5Q9HBB8 845 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 CYP26B1Q9NR63 512 aa29.14■■■□□ 2.26
VEGFA-226ENST00000611736 KDM3AQ9Y4C1 1321 aa29.14■■■□□ 2.25
VEGFA-226ENST00000611736 VPS37CA5D8V6 355 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-226ENST00000611736 YWHABP31946 246 aaKnown RBP29.13■■■□□ 2.25
VEGFA-226ENST00000611736 PTGDRQ13258 359 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms