RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 ATP5OP48047 213 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 MXI1P50539 228 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 ARHGAP4P98171 946 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PTK2Q05397 1052 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 C12orf60Q5U649 245 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SDCCAG8Q86SQ7 713 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 SCYL3Q8IZE3 742 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 MSANTD4Q8NCY6 345 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SLC30A5Q8TAD4 765 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 LRRC8CQ8TDW0 803 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 N4BP2L2Q92802 583 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 RNF25Q96BH1 459 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 CALN1Q9BXU9 219 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 EFCC1Q9HA90 598 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 ALG13Q9NP73 1137 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 SH3GLB2Q9NR46 395 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SMYD2Q9NRG4 433 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 FAM114A2Q9NRY5 505 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 TPX2Q9ULW0 747 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 HPCAL4Q9UM19 191 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 BZW2Q9Y6E2 419 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 CNTNAP5Q8WYK1 1306 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 RFX7Q2KHR2 1363 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 LRRD1A4D1F6 860 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 A6NNZ2 444 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PHF20L1A8MW92 1017 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 I3L4J1 428 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 C21orf2O43822 256 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SLC37A4O43826 429 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SPAG7O75391 227 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SASH3O75995 380 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SRGAP2CP0DJJ0 459 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 VEGFAP15692 232 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 CRKP46108 304 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 MKRN3Q13064 507 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 AOC3Q16853 763 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 TUBB8Q3ZCM7 444 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 EPC2Q52LR7 807 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PDXDC1Q6P996 788 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 FOXR1Q6PIV2 292 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 RNF207Q6ZRF8 634 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 CYFIP1Q7L576 1253 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 TXNRD3Q86VQ6 643 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SULF1Q8IWU6 871 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SRRM1Q8IYB3 904 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 KCNB2Q92953 911 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 KLHL29Q96CT2 875 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PACSIN1Q9BY11 444 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 RAVER2Q9HCJ3 691 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 ANAPC7Q9UJX3 599 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SNX12Q9UMY4 172 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-210ENST00000611646 PXDNLA1KZ92 1463 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 FAM205AQ6ZU69 1335 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PNPLA7Q6ZV29 1317 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 STXBP3O00186 592 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 ABL1P00519 1130 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 MYL1P05976 194 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 TMEM191BP0C7N4 346 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 MAGEA9P43362 315 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 C2CD6Q53TS8 623 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 ALS2CLQ60I27 953 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 NXNQ6DKJ4 435 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 EMBQ6PCB8 327 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 GADL1Q6ZQY3 521 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 RBM43Q6ZSC3 357 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 C3orf67Q6ZVT6 689 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 HIPK4Q8NE63 616 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SPIRE2Q8WWL2 714 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 HSPH1Q92598 858 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 CFAP36Q96G28 342 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PBKQ96KB5 322 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 ACCSQ96QU6 501 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 NACC1Q96RE7 527 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 MPHOSPH6Q99547 160 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 ZNF341Q9BYN7 854 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 LACRTQ9GZZ8 138 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 FIS1Q9Y3D6 152 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 CAPN6Q9Y6Q1 641 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 ZSCAN5CA6NGD5 496 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 CAMTA2O94983 1202 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 FTLP02792 175 aaPredicted RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 SRGNP10124 158 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 KITP10721 976 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PLS3P13797 630 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PSMD2Q13200 908 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 PPP2R5AQ15172 486 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 KNOP1Q1ED39 458 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 MAP7D1Q3KQU3 841 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SRLQ86TD4 932 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 NLRP14Q86W24 1093 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 LMNTD2Q8IXW0 634 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 NME8Q8N427 588 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 LINC00116Q8NCU8 138 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 CFAP61Q8NHU2 1237 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 SREK1Q8WXA9 508 aaKnown RBP4.1□□□□□ -1.75
RNF38-210ENST00000611646 FAM213AQ9BRX8 229 aa4.1□□□□□ -1.75
RNF38-210ENST00000611646 FUT8Q9BYC5 575 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms