RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CUL5Q93034 780 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 BZW2Q9Y6E2 419 aaKnown RBP16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 NHSQ6T4R5 1651 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 H2AFZP0C0S5 128 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 PRKCIP41743 596 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 CASP4P49662 377 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 EPHA7Q15375 998 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 H2AFVQ71UI9 128 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 ZNF804AQ7Z570 1209 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 FUKQ8N0W3 1084 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 SLITRK6Q9H5Y7 841 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 ACTR5Q9H9F9 607 aaPredicted RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 SUCLA2Q9P2R7 463 aaPredicted RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 AHDC1Q5TGY3 1603 aaPredicted RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 OPLAHO14841 1288 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 FGGP02679 453 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 XRCC5P13010 732 aaKnown RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 SCTRP47872 440 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 POU5F1Q01860 360 aaKnown RBP16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 DCAF12L1Q5VU92 463 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 FRMD5Q7Z6J6 570 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 SEC14L1Q92503 715 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 HES6Q96HZ4 224 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 PSMD1Q99460 953 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
PCDHGB1-202ENST00000611598 F8W031 263 aaPredicted RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 CAND2O75155 1236 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 GFPT2O94808 682 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 SHBGP04278 402 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 DRD4P21917 467 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 CDR1P51861 262 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 ZNF543Q08ER8 600 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 PICALMQ13492 652 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 CCDC26Q8TAB7 109 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 IKZF4Q9H2S9 585 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 PSTPIP2Q9H939 334 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 UTP11Q9Y3A2 253 aaKnown RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 ARFGEF1Q9Y6D6 1849 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 IGSF9BQ9UPX0 1349 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 BUB1BO60566 1050 aaPredicted RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 RDXP35241 583 aaKnown RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 GALCP54803 685 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 JAM2P57087 298 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 KCNA1Q09470 495 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 GIT2Q14161 759 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 KNOP1Q1ED39 458 aaKnown RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 KCTD1Q719H9 257 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 CPLX4Q7Z7G2 160 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 PARP9Q8IXQ6 854 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 LNX1Q8TBB1 728 aaPredicted RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 GCNT4Q9P109 453 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 TRAF3IP3Q9Y228 551 aa16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
PCDHGB1-202ENST00000611598 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.22
PCDHGB1-202ENST00000611598 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 PREPLQ4J6C6 727 aaPredicted RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 FMO2Q99518 471 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 EPB41L4BQ9H329 900 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 CD209Q9NNX6 404 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 PPP1R9AQ9ULJ8 1098 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 CLIC2O15247 247 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 PRPF4BQ13523 1007 aaKnown RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 GKAP1Q5VSY0 366 aaPredicted RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 CATSPER3Q86XQ3 398 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 SLC35C1Q96A29 364 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 TLCD1Q96CP7 247 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 ERVK-5Q9HDB9 667 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 KCNMB3Q9NPA1 279 aa16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 TPX2Q9ULW0 747 aaKnown RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
PCDHGB1-202ENST00000611598 SLURP2P0DP57 97 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 UBAP2Q5T6F2 1119 aaKnown RBP16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 CCT6BQ92526 530 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 GLG1Q92896 1179 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 SGSM3Q96HU1 749 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 TXLNGYQ9BZA5 131 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 FAM114A2Q9NRY5 505 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 MCM8Q9UJA3 840 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms