RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 ARP10275 920 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 PRELPP51888 382 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 C1orf186Q6ZWK4 172 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 ZNF571Q7Z3V5 609 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-211ENST00000611379 SLC5A5Q92911 643 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 SLC35C1Q96A29 364 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 EHMT1Q9H9B1 1298 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 ZNF277Q9NRM2 450 aaPredicted RBP17.47■□□□□ 0.39
TRIM46-211ENST00000611379 RBM12Q9NTZ6 932 aaKnown RBP17.47■□□□□ 0.39
TRIM46-211ENST00000611379 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
TRIM46-211ENST00000611379 RNASE9P60153 205 aaKnown RBP17.46■□□□□ 0.39
TRIM46-211ENST00000611379 EPHA7Q15375 998 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
TRIM46-211ENST00000611379 DNAAF5Q86Y56 855 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
TRIM46-211ENST00000611379 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
TRIM46-211ENST00000611379 PKD2L1Q9P0L9 805 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 GCNT4Q9P109 453 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
TRIM46-211ENST00000611379 PPP2R5CQ13362 524 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 GJB7Q6PEY0 223 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 LDHDQ86WU2 507 aa17.46■□□□□ 0.39
TRIM46-211ENST00000611379 SHTN1A0MZ66 631 aa17.46■□□□□ 0.38
TRIM46-211ENST00000611379 SLC16A3O15427 465 aaKnown RBP17.46■□□□□ 0.38
TRIM46-211ENST00000611379 NOP2P46087 812 aaKnown RBP17.46■□□□□ 0.38
TRIM46-211ENST00000611379 HNRNPH2P55795 449 aaKnown RBP17.46■□□□□ 0.38
TRIM46-211ENST00000611379 SLC15A2Q16348 729 aa17.46■□□□□ 0.38
TRIM46-211ENST00000611379 DPY19L2P1Q6NXN4 242 aa17.46■□□□□ 0.38
TRIM46-211ENST00000611379 C8orf74Q6P047 294 aa17.46■□□□□ 0.38
TRIM46-211ENST00000611379 SND1Q7KZF4 910 aaKnown RBP eCLIP17.46■□□□□ 0.38
TRIM46-211ENST00000611379 FAM186BQ8IYM0 893 aa17.46■□□□□ 0.38
TRIM46-211ENST00000611379 RBM46Q8TBY0 533 aaKnown RBP17.46■□□□□ 0.38
TRIM46-211ENST00000611379 RIN2Q8WYP3 895 aaPredicted RBP17.46■□□□□ 0.38
TRIM46-211ENST00000611379 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
TRIM46-211ENST00000611379 ZNF772Q68DY9 489 aaPredicted RBP17.45■□□□□ 0.38
TRIM46-211ENST00000611379 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 KCTD17Q8N5Z5 321 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 UNC45AQ9H3U1 944 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 BZW2Q9Y6E2 419 aaKnown RBP17.45■□□□□ 0.38
TRIM46-211ENST00000611379 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
TRIM46-211ENST00000611379 RNF40O75150 1001 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 PSMC2P35998 433 aaKnown RBP17.45■□□□□ 0.38
TRIM46-211ENST00000611379 COG2Q14746 738 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 PLEKHA4Q9H4M7 779 aa17.45■□□□□ 0.38
TRIM46-211ENST00000611379 WRAP73Q9P2S5 460 aaPredicted RBP17.45■□□□□ 0.38
TRIM46-211ENST00000611379 SYF2O95926 243 aaKnown RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 PLS1Q14651 629 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 ODR4Q5SWX8 454 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 ALKBH5Q6P6C2 394 aaKnown RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 WDR11Q9BZH6 1224 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 CALCOCO1Q9P1Z2 691 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 STIM2Q9P246 746 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 PCDHGC5Q9Y5F6 944 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 IPO5O00410 1097 aaKnown RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 EIF3DO15371 548 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 CAPN2P17655 700 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 CYP2J2P51589 502 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 MAEAQ7L5Y9 396 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 HS2ST1Q7LGA3 356 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 GOLGA6L1Q8N7Z2 621 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 BANK1Q8NDB2 785 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 FAM204AQ9H8W3 233 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 PSD3Q9NYI0 1048 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 AJAP1Q9UKB5 411 aaPredicted RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 SCAF8Q9UPN6 1271 aaKnown RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 CNTNAP1P78357 1384 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 GRID2IPA4D2P6 1211 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 GGCXP38435 758 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 AENQ8WTP8 325 aaKnown RBP17.44■□□□□ 0.38
TRIM46-211ENST00000611379 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 TEKT3Q9BXF9 490 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 RNF14Q9UBS8 474 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 NAGPAQ9UK23 515 aa17.44■□□□□ 0.38
TRIM46-211ENST00000611379 CAP2P40123 477 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 AARSP49588 968 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIM46-211ENST00000611379 PTPROQ16827 1216 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 MEI1Q5TIA1 1274 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 ZNF720Q7Z2F6 126 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 GMLQ99445 158 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 LXNQ9BS40 222 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 GOLPH3Q9H4A6 298 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 SIX2Q9NPC8 291 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 C10orf76Q5T2E6 689 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 VPS36Q86VN1 386 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 TAF4BQ92750 862 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 STK32BQ9NY57 414 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 CCPG1Q9ULG6 757 aa17.43■□□□□ 0.38
TRIM46-211ENST00000611379 ARHGEF35A5YM69 484 aa17.42■□□□□ 0.38
TRIM46-211ENST00000611379 FLOT1O75955 427 aa17.42■□□□□ 0.38
TRIM46-211ENST00000611379 GFPT2O94808 682 aa17.42■□□□□ 0.38
TRIM46-211ENST00000611379 TAF3Q5VWG9 929 aa17.42■□□□□ 0.38
TRIM46-211ENST00000611379 STXBP4Q6ZWJ1 553 aa17.42■□□□□ 0.38
TRIM46-211ENST00000611379 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms