RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 COL6A3P12111 3177 aa15.06■□□□□ 0
SENP3-209ENST00000610454 PTPRSQ13332 1948 aa15.06■□□□□ 0
SENP3-209ENST00000610454 FAM205CA6NFA0 338 aa15.06■□□□□ 0
SENP3-209ENST00000610454 NEMFO60524 1076 aa15.06■□□□□ 0
SENP3-209ENST00000610454 CA3P07451 260 aa15.06■□□□□ 0
SENP3-209ENST00000610454 MYOGP15173 224 aa15.06■□□□□ 0
SENP3-209ENST00000610454 ATP4AP20648 1035 aa15.06■□□□□ 0
SENP3-209ENST00000610454 MGAT3Q09327 533 aa15.06■□□□□ 0
SENP3-209ENST00000610454 GRIN2CQ14957 1233 aa15.06■□□□□ 0
SENP3-209ENST00000610454 UGCGQ16739 394 aa15.06■□□□□ 0
SENP3-209ENST00000610454 EARS2Q5JPH6 523 aaKnown RBP15.06■□□□□ 0
SENP3-209ENST00000610454 FAM117BQ6P1L5 589 aa15.06■□□□□ 0
SENP3-209ENST00000610454 POTEDQ86YR6 584 aa15.06■□□□□ 0
SENP3-209ENST00000610454 MAP7D2Q96T17 732 aa15.06■□□□□ 0
SENP3-209ENST00000610454 CELF4Q9BZC1 486 aaKnown RBP15.06■□□□□ 0
SENP3-209ENST00000610454 GINS2Q9Y248 185 aa15.06■□□□□ 0
SENP3-209ENST00000610454 LOXHD1Q8IVV2 1947 aa15.05■□□□□ 0
SENP3-209ENST00000610454 CDH23Q9H251 3354 aa15.05■□□□□ 0
SENP3-209ENST00000610454 CHD9Q3L8U1 2897 aa15.05■□□□□ 0
SENP3-209ENST00000610454 ZNF862O60290 1169 aa15.05■□□□□ -0
SENP3-209ENST00000610454 GJB5O95377 273 aa15.05■□□□□ -0
SENP3-209ENST00000610454 C22orf31O95567 290 aa15.05■□□□□ -0
SENP3-209ENST00000610454 PSMC5P62195 406 aa15.05■□□□□ -0
SENP3-209ENST00000610454 TBC1D8BQ0IIM8 1120 aa15.05■□□□□ -0
SENP3-209ENST00000610454 PAK2Q13177 524 aa15.05■□□□□ -0
SENP3-209ENST00000610454 PPP2R5CQ13362 524 aa15.05■□□□□ -0
SENP3-209ENST00000610454 LPIN1Q14693 890 aa15.05■□□□□ -0
SENP3-209ENST00000610454 CALCRLQ16602 461 aa15.05■□□□□ -0
SENP3-209ENST00000610454 TCTN1Q2MV58 587 aa15.05■□□□□ -0
SENP3-209ENST00000610454 XKR3Q5GH77 459 aa15.05■□□□□ -0
SENP3-209ENST00000610454 FBXO47Q5MNV8 452 aa15.05■□□□□ -0
SENP3-209ENST00000610454 ODR4Q5SWX8 454 aa15.05■□□□□ -0
SENP3-209ENST00000610454 NCAPH2Q6IBW4 605 aa15.05■□□□□ -0
SENP3-209ENST00000610454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.05■□□□□ -0
SENP3-209ENST00000610454 BANK1Q8NDB2 785 aa15.05■□□□□ -0
SENP3-209ENST00000610454 FBXO18Q8NFZ0 1043 aa15.05■□□□□ -0
SENP3-209ENST00000610454 RAD9AQ99638 391 aa15.05■□□□□ -0
SENP3-209ENST00000610454 PRDM12Q9H4Q4 367 aa15.05■□□□□ -0
SENP3-209ENST00000610454 AKT3Q9Y243 479 aa15.05■□□□□ -0
SENP3-209ENST00000610454 SQORQ9Y6N5 450 aa15.05■□□□□ -0
SENP3-209ENST00000610454 ZBTB42B2RXF5 422 aa15.04■□□□□ -0
SENP3-209ENST00000610454 ATP2B1P20020 1258 aa15.04■□□□□ -0
SENP3-209ENST00000610454 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
SENP3-209ENST00000610454 MTERF2Q49AM1 385 aa15.04■□□□□ -0
SENP3-209ENST00000610454 TMCO2Q7Z6W1 182 aaPredicted RBP15.04■□□□□ -0
SENP3-209ENST00000610454 TMX3Q96JJ7 454 aa15.04■□□□□ -0
SENP3-209ENST00000610454 SCLT1Q96NL6 688 aa15.04■□□□□ -0
SENP3-209ENST00000610454 FTHL17Q9BXU8 183 aa15.04■□□□□ -0
SENP3-209ENST00000610454 FOXP1Q9H334 677 aaPredicted RBP15.04■□□□□ -0
SENP3-209ENST00000610454 SUGCTQ9HAC7 445 aa15.04■□□□□ -0
SENP3-209ENST00000610454 VAV3Q9UKW4 847 aa15.04■□□□□ -0
SENP3-209ENST00000610454 NOL7Q9UMY1 257 aaKnown RBP15.04■□□□□ -0
SENP3-209ENST00000610454 PCDHA12Q9UN75 941 aa15.04■□□□□ -0
SENP3-209ENST00000610454 INSL6Q9Y581 213 aa15.04■□□□□ -0
SENP3-209ENST00000610454 KDM3AQ9Y4C1 1321 aa15.03■□□□□ -0
SENP3-209ENST00000610454 DDX11L8A8MPP1 907 aa15.03■□□□□ -0
SENP3-209ENST00000610454 UPP2O95045 317 aa15.03■□□□□ -0
SENP3-209ENST00000610454 P4HBP07237 508 aaKnown RBP15.03■□□□□ -0
SENP3-209ENST00000610454 CD52P31358 61 aa15.03■□□□□ -0
SENP3-209ENST00000610454 DNM2P50570 870 aa15.03■□□□□ -0
SENP3-209ENST00000610454 EFCAB12Q6NXP0 572 aa15.03■□□□□ -0
SENP3-209ENST00000610454 B3GNT9Q6UX72 402 aa15.03■□□□□ -0
SENP3-209ENST00000610454 KIAA0319LQ8IZA0 1049 aa15.03■□□□□ -0
SENP3-209ENST00000610454 ZNF710Q8N1W2 664 aa15.03■□□□□ -0
SENP3-209ENST00000610454 HAS1Q92839 578 aa15.03■□□□□ -0
SENP3-209ENST00000610454 PPP1R16BQ96T49 567 aa15.03■□□□□ -0
SENP3-209ENST00000610454 YME1L1Q96TA2 773 aa15.03■□□□□ -0
SENP3-209ENST00000610454 JPH2Q9BR39 696 aaPredicted RBP15.03■□□□□ -0
SENP3-209ENST00000610454 OSBPL7Q9BZF2 842 aa15.03■□□□□ -0
SENP3-209ENST00000610454 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
SENP3-209ENST00000610454 EML1O00423 815 aa15.02■□□□□ -0
SENP3-209ENST00000610454 RPS6KA5O75582 802 aa15.02■□□□□ -0
SENP3-209ENST00000610454 VTNP04004 478 aa15.02■□□□□ -0
SENP3-209ENST00000610454 IGFBP4P22692 258 aa15.02■□□□□ -0
SENP3-209ENST00000610454 MCM7P33993 719 aa15.02■□□□□ -0
SENP3-209ENST00000610454 TXKP42681 527 aa15.02■□□□□ -0
SENP3-209ENST00000610454 CLCN3P51790 818 aa15.02■□□□□ -0
SENP3-209ENST00000610454 NFX1Q12986 1120 aaKnown RBP15.02■□□□□ -0
SENP3-209ENST00000610454 EPHA7Q15375 998 aa15.02■□□□□ -0
SENP3-209ENST00000610454 KIZQ2M2Z5 673 aa15.02■□□□□ -0
SENP3-209ENST00000610454 NOSTRINQ8IVI9 506 aa15.02■□□□□ -0
SENP3-209ENST00000610454 LRRC71Q8N4P6 559 aa15.02■□□□□ -0
SENP3-209ENST00000610454 MAFAQ8NHW3 353 aaPredicted RBP15.02■□□□□ -0
SENP3-209ENST00000610454 CCDC43Q96MW1 224 aaKnown RBP15.02■□□□□ -0
SENP3-209ENST00000610454 NIFKQ9BYG3 293 aaKnown RBP15.02■□□□□ -0
SENP3-209ENST00000610454 TTC12Q9H892 705 aaPredicted RBP15.02■□□□□ -0
SENP3-209ENST00000610454 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
SENP3-209ENST00000610454 CHD7Q9P2D1 2997 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 H3BQV1 296 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 GPR182O15218 404 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 CRYBB1P53674 252 aaPredicted RBP15.01□□□□□ -0.01
SENP3-209ENST00000610454 TAP1Q03518 808 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 ORC2Q13416 577 aaPredicted RBP15.01□□□□□ -0.01
SENP3-209ENST00000610454 MCTP1Q6DN14 999 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 FAM43BQ6ZT52 329 aaPredicted RBP15.01□□□□□ -0.01
SENP3-209ENST00000610454 OTUD6AQ7L8S5 288 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 EXOC8Q8IYI6 725 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 NEK9Q8TD19 979 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 ARNTL2Q8WYA1 636 aa15.01□□□□□ -0.01
SENP3-209ENST00000610454 TOP1MTQ969P6 601 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms