RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 LRRIQ3A6PVS8 624 aaPredicted RBP9.81□□□□□ -0.84
COL25A1-208ENST00000610288 DLATP10515 647 aaKnown RBP9.81□□□□□ -0.84
COL25A1-208ENST00000610288 P4HA1P13674 534 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 YWHAGP61981 247 aaKnown RBP eCLIP9.81□□□□□ -0.84
COL25A1-208ENST00000610288 HDLBPQ00341 1268 aaKnown RBP9.81□□□□□ -0.84
COL25A1-208ENST00000610288 PTK2Q05397 1052 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 GFPT1Q06210 699 aaPredicted RBP9.81□□□□□ -0.84
COL25A1-208ENST00000610288 KCNB1Q14721 858 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 MFSD4BQ5TF39 518 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 PPP1R2P3Q6NXS1 205 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 RSRC2Q7L4I2 434 aaKnown RBP9.81□□□□□ -0.84
COL25A1-208ENST00000610288 KRT26Q7Z3Y9 468 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 KSR1Q8IVT5 923 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 KCNV2Q8TDN2 545 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 CYFIP2Q96F07 1278 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 HIC2Q96JB3 615 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 SEC16BQ96JE7 1060 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 PAGR1Q9BTK6 254 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 MXD3Q9BW11 206 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 TRPC6Q9Y210 931 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 PLEKHG2Q9H7P9 1386 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 HEG1Q9ULI3 1381 aa9.81□□□□□ -0.84
COL25A1-208ENST00000610288 MAN1A2O60476 641 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 SPAG7O75391 227 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
COL25A1-208ENST00000610288 SNX1Q13596 522 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 PTGISQ16647 500 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ODR4Q5SWX8 454 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 STOX1Q6ZVD7 989 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 MCF2L2Q86YR7 1114 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 STAG2Q8N3U4 1231 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 NT5C1BQ96P26 610 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CD248Q9HCU0 757 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 INTUQ9ULD6 942 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ARL2BPQ9Y2Y0 163 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 TET3O43151 1660 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 PREX2Q70Z35 1606 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 GOLGA8QA0A0J9YX86 632 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 GOLGA8OA6NCC3 632 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 GOLGA8NF8WBI6 632 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 IPO5O00410 1097 aaKnown RBP9.8□□□□□ -0.84
COL25A1-208ENST00000610288 MCF2LO15068 1137 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ZBTB8OSQ8IWT0 167 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 METTL13Q8N6R0 699 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 NUDCD1Q96RS6 583 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 EPS15L1Q9UBC2 864 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 H3BQF6 201 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ZWINTO95229 277 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 AGTP01019 485 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 BRAFP15056 766 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CHRNA3P32297 505 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CTCFP49711 727 aaPredicted RBP9.8□□□□□ -0.84
COL25A1-208ENST00000610288 NOP14P78316 857 aaKnown RBP9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 FAM47EQ6ZV65 393 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 TBC1D10CQ8IV04 446 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 RNF217Q8TC41 542 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CNKSR1Q969H4 720 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CSADQ9Y600 493 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 MADDQ8WXG6 1647 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ZNF185O15231 689 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CRCPO75575 148 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 POLR2BP30876 1174 aaKnown RBP9.8□□□□□ -0.84
COL25A1-208ENST00000610288 DCAF15Q66K64 600 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 SPICE1Q8N0Z3 855 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 FAM81BQ96LP2 452 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ZIM3Q96PE6 472 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 ZFP69BQ9UJL9 534 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 CCPG1Q9ULG6 757 aa9.8□□□□□ -0.84
COL25A1-208ENST00000610288 SSU72P8A0A1W2PR75 194 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 RASA4BC9J798 803 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 H0YCG3 227 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 RASA4O43374 803 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 SORBS3O60504 671 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 HNRNPCL1O60812 293 aaKnown RBP9.79□□□□□ -0.84
COL25A1-208ENST00000610288 TTLL1O95922 423 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 GNAT1P11488 350 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 CDC27P30260 824 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 ALX1Q15699 326 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 LCA5Q86VQ0 697 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 PIP4K2CQ8TBX8 421 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 CDKL2Q92772 493 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 XPO6Q96QU8 1125 aaKnown RBP9.79□□□□□ -0.84
COL25A1-208ENST00000610288 IFT122Q9HBG6 1241 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 LY9Q9HBG7 655 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 AFF2P51816 1311 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 ERVV-1B6SEH8 477 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 H7C1W4 665 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 HAUS5O94927 633 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 KRT14P02533 472 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 GYPCP04921 128 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 IGKV5-2P06315 115 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 GSTA2P09210 222 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
COL25A1-208ENST00000610288 CDR2Q01850 454 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 DHX34Q14147 1143 aaKnown RBP9.79□□□□□ -0.84
COL25A1-208ENST00000610288 BSPRYQ5W0U4 402 aa9.79□□□□□ -0.84
COL25A1-208ENST00000610288 KDM7AQ6ZMT4 941 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms