RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 MGAT3Q09327 533 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 MBTPS1Q14703 1052 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.16
HDDC2-209ENST00000609477 UGCGQ16739 394 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 TRAPPC12Q8WVT3 735 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 SEPT8Q92599 483 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 SLC9A7Q96T83 725 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 HSD17B14Q9BPX1 270 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
HDDC2-209ENST00000609477 LAMA3Q16787 3333 aa16.02■□□□□ 0.15
HDDC2-209ENST00000609477 SOX1O00570 391 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-209ENST00000609477 STBD1O95210 358 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 LYPLA2O95372 231 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■□□□□ 10.1
HDDC2-209ENST00000609477 PRPHP41219 470 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 KCNJ6P48051 423 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 TBC1D8BQ0IIM8 1120 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 PDIA5Q14554 519 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 ZNF174Q15697 407 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 TMEM266Q2M3C6 531 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 ODR4Q5SWX8 454 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 NCAPH2Q6IBW4 605 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 KIAA0319LQ8IZA0 1049 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 RAB34Q9BZG1 259 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-209ENST00000609477 TMEM60Q9H2L4 133 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 CXXC1Q9P0U4 656 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-209ENST00000609477 TRPV2Q9Y5S1 764 aa16.01■□□□□ 0.15
HDDC2-209ENST00000609477 TET1Q8NFU7 2136 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 ZBBXA8MT70 800 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 SLITRK3O94933 977 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 CTSHP09668 335 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 ATP2A2P16615 1042 aaKnown RBP16■□□□□ 0.15
HDDC2-209ENST00000609477 MUTP22033 750 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 DNM2P50570 870 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
HDDC2-209ENST00000609477 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
HDDC2-209ENST00000609477 RAB30Q15771 203 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 TSHZ1Q6ZSZ6 1077 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 ANO5Q75V66 913 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 LINC01465Q8N7H1 131 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 C4orf32Q8N8J7 132 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 DBF4BQ8NFT6 615 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 ERMNQ8TAM6 284 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 MAP7D2Q96T17 732 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 EIF2AK1Q9BQI3 630 aaKnown RBP16■□□□□ 0.15
HDDC2-209ENST00000609477 LXNQ9BS40 222 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
HDDC2-209ENST00000609477 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
HDDC2-209ENST00000609477 SEPT9Q9UHD8 586 aaPredicted RBP16■□□□□ 0.15
HDDC2-209ENST00000609477 CDY2AQ9Y6F7 541 aa16■□□□□ 0.15
HDDC2-209ENST00000609477 IGKV6-21A0A0C4DH24 114 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 DDX11L8A8MPP1 907 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 GAS2O43903 313 aaKnown RBP15.99■□□□□ 0.15
HDDC2-209ENST00000609477 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
HDDC2-209ENST00000609477 PTGDRQ13258 359 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 FBXO47Q5MNV8 452 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
HDDC2-209ENST00000609477 METTL13Q8N6R0 699 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 LRCH3Q96II8 777 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 CEP89Q96ST8 783 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 FTHL17Q9BXU8 183 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 TUFT1Q9NNX1 390 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.99■□□□□ 0.15
HDDC2-209ENST00000609477 EVPLQ92817 2033 aa15.99■□□□□ 0.15
HDDC2-209ENST00000609477 BMP15O95972 392 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
HDDC2-209ENST00000609477 RFC5P40937 340 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 TECP42680 631 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 CRYBB1P53674 252 aaPredicted RBP15.98■□□□□ 0.15
HDDC2-209ENST00000609477 WDR5P61964 334 aaKnown RBP15.98■□□□□ 0.15
HDDC2-209ENST00000609477 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
HDDC2-209ENST00000609477 HAUS3Q68CZ6 603 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 TPH2Q8IWU9 490 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 SLC7A3Q8WY07 619 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 DYDC2Q96IM9 177 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 POLR3CQ9BUI4 534 aaPredicted RBP15.98■□□□□ 0.15
HDDC2-209ENST00000609477 ANKEF1Q9NU02 776 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 MSRAQ9UJ68 235 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 PCDHA11Q9Y5I1 949 aa15.98■□□□□ 0.15
HDDC2-209ENST00000609477 SIP14410 1827 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 SYT1P21579 422 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 RPA1P27694 616 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
HDDC2-209ENST00000609477 LPIN1Q14693 890 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 MTERF2Q49AM1 385 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 KCTD17Q8N5Z5 321 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 IGSF22Q8N9C0 903 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 ZBTB10Q96DT7 871 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
HDDC2-209ENST00000609477 POTEMA6NI47 508 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms