RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 ARHGAP29Q52LW3 1261 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 WDR59Q6PJI9 974 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 ZNF720Q7Z2F6 126 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 METTL14Q9HCE5 456 aaKnown RBP12.59□□□□□ -0.39
LINC01278-204ENST00000609143 CCNE2O96020 404 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
LINC01278-204ENST00000609143 CASQ1P31415 396 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 CDK17Q00537 523 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
LINC01278-204ENST00000609143 SENP7Q9BQF6 1050 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 TIPINQ9BVW5 301 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 LARSQ9P2J5 1176 aaKnown RBP12.59□□□□□ -0.39
LINC01278-204ENST00000609143 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 MYH11P35749 1972 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 PFASO15067 1338 aa12.59□□□□□ -0.39
LINC01278-204ENST00000609143 A0A0G2JLL6 359 aaPredicted RBP12.58□□□□□ -0.39
LINC01278-204ENST00000609143 CXCL11O14625 94 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 KIF5CO60282 957 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.39
LINC01278-204ENST00000609143 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.39
LINC01278-204ENST00000609143 MAPK7Q13164 816 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 NFIL3Q16649 462 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 PRRT2Q7Z6L0 340 aaPredicted RBP12.58□□□□□ -0.39
LINC01278-204ENST00000609143 SMAP1Q8IYB5 467 aaPredicted RBP12.58□□□□□ -0.39
LINC01278-204ENST00000609143 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 FIZ1Q96SL8 496 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 IWS1Q96ST2 819 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 MOV10L1Q9BXT6 1211 aaKnown RBP12.58□□□□□ -0.39
LINC01278-204ENST00000609143 ANKEF1Q9NU02 776 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 PCDHA10Q9Y5I2 948 aa12.58□□□□□ -0.39
LINC01278-204ENST00000609143 ZMYM2Q9UBW7 1377 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 IRF6O14896 467 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 DKC1O60832 514 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 HNRNPH3P31942 346 aaKnown RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 KRT83P78385 493 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 KCNA1Q09470 495 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 ALCAMQ13740 583 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 ZC2HC1CQ53FD0 456 aaPredicted RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 CACNA2D4Q7Z3S7 1137 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 RIOX2Q8IUF8 465 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 DNERQ8NFT8 737 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 GOLGA5Q8TBA6 731 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 PLAGL2Q9UPG8 496 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 NFASCO94856 1347 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 TGFB1I1O43294 461 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 SLU7O95391 586 aaKnown RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 MAPTP10636 758 aaKnown RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
LINC01278-204ENST00000609143 KCNA2P16389 499 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 KCNMA1Q12791 1236 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 UGCGQ16739 394 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 DAW1Q8N136 415 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 CCDC155Q8N6L0 562 aa12.58□□□□□ -0.4
LINC01278-204ENST00000609143 KIAA1217Q5T5P2 1943 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 EPHB6O15197 1021 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 CLIC2O15247 247 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 AKAP3O75969 853 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 KCNH2Q12809 1159 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 ATP6V0A1Q93050 837 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 CLMNQ96JQ2 1002 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 DRC1Q96MC2 740 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 WDR24Q96S15 920 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 GBP3Q9H0R5 595 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 NUCKS1Q9H1E3 243 aaKnown RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 NHEJ1Q9H9Q4 299 aaPredicted RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 CEP72Q9P209 647 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 K7ENM7 598 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 RGS20O76081 388 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 AFPP02771 609 aaKnown RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 PPIL2Q13356 520 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 STXBP2Q15833 593 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 RRAGAQ7L523 313 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 MAEAQ7L5Y9 396 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 TSC1Q92574 1164 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 MKNK1Q9BUB5 465 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 BTBD7Q9P203 1132 aa12.57□□□□□ -0.4
LINC01278-204ENST00000609143 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
LINC01278-204ENST00000609143 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 EIF3CLB5ME19 914 aaKnown RBP12.56□□□□□ -0.4
LINC01278-204ENST00000609143 PSAPP07602 524 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 PLS3P13797 630 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
LINC01278-204ENST00000609143 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
LINC01278-204ENST00000609143 EIF3CQ99613 913 aaKnown RBP12.56□□□□□ -0.4
LINC01278-204ENST00000609143 SPATC1LQ9H0A9 340 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms