RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	IFIH1	Q9BYX4	1025 aa	Known RBP	12.16	□□□□□ -0.46
TPM2-208	ENST00000607559	PRDM6	Q9NQX0	595 aa		12.16	□□□□□ -0.46
TPM2-208	ENST00000607559	PKD2L1	Q9P0L9	805 aa		12.16	□□□□□ -0.46
TPM2-208	ENST00000607559	MTCH2	Q9Y6C9	303 aa		12.16	□□□□□ -0.46
TPM2-208	ENST00000607559	STK36	Q9NRP7	1315 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	LCHN	A4D1U4	455 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	LINC01553	A4QN01	128 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	EPOP	A6NHQ4	379 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	TNFRSF10A	O00220	468 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	ENPP3	O14638	875 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	PSMD10	O75832	226 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	CDKL5	O76039	1030 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	MARK3	P27448	753 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	NLRP5	P59047	1200 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	MRPS6	P82932	125 aa	Known RBP	12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	SCRN1	Q12765	414 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	AAK1	Q2M2I8	961 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	MIS18BP1	Q6P0N0	1132 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	MTHFD1L	Q6UB35	978 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	BLID	Q8IZY5	108 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	RDM1	Q8NG50	284 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	RASGRP4	Q8TDF6	673 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	TGS1	Q96RS0	853 aa	Known RBP	12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	ZBED2	Q9BTP6	218 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	PHF20	Q9BVI0	1012 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	TPCN1	Q9ULQ1	816 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	XIRP2	A4UGR9	3374 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	COL4A6	Q14031	1691 aa		12.15	□□□□□ -0.46
TPM2-208	ENST00000607559	REV3L	O60673	3130 aa		12.15	□□□□□ -0.47
TPM2-208	ENST00000607559	IGSF9B	Q9UPX0	1349 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	MSH4	O15457	936 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	CTDNEP1	O95476	244 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	CTSH	P09668	335 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	KLRC1	P26715	233 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	PRR16	Q569H4	304 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	SWSAP1	Q6NVH7	229 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	TSHZ1	Q6ZSZ6	1077 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	KIAA0319L	Q8IZA0	1049 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	TBCK	Q8TEA7	893 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	SAMD11	Q96NU1	681 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	FTHL17	Q9BXU8	183 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	CELF4	Q9BZC1	486 aa	Known RBP	12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	RC3H2	Q9HBD1	1191 aa	Known RBP	12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	ZNF302	Q9NR11	478 aa		12.14	□□□□□ -0.47
TPM2-208	ENST00000607559	DOCK5	Q9H7D0	1870 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	WDR64	B1ANS9	1081 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	CENPB	P07199	599 aa	Predicted RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	PSAP	P07602	524 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	SFN	P31947	248 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	GRB10	Q13322	594 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	DSG2	Q14126	1118 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	PPP4R3A	Q6IN85	833 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	PDXDC2P	Q6P474	469 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	PLPP6	Q8IY26	295 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	LINC01465	Q8N7H1	131 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	ZNF689	Q96CS4	500 aa	Predicted RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	LARP6	Q9BRS8	491 aa	Known RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	SLK	Q9H2G2	1235 aa	Predicted RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	AGO3	Q9H9G7	860 aa	Known RBP	12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	SUGCT	Q9HAC7	445 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	COG5	Q9UP83	839 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	CDY2A	Q9Y6F7	541 aa		12.13	□□□□□ -0.47
TPM2-208	ENST00000607559	C5orf67	F2Z3F1	127 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	RFXAP	O00287	272 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	BACH1	O14867	736 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	MAGEB2	O15479	319 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	ZNF862	O60290	1169 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	PPFIA3	O75145	1194 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	C22orf31	O95567	290 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	LINC00271	P0C7V0	271 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	GHR	P10912	638 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	FDPS	P14324	419 aa	Known RBP	12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	JAK3	P52333	1124 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	AK2	P54819	239 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	FOXK1	P85037	733 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	TARBP2	Q15633	366 aa	Known RBP	12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	KRT25	Q7Z3Z0	450 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	SPRED2	Q7Z698	418 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	MYOCD	Q8IZQ8	938 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	MICALL1	Q8N3F8	863 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	ETNPPL	Q8TBG4	499 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	ADAMTS19	Q8TE59	1207 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	TRAPPC12	Q8WVT3	735 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	ARNTL2	Q8WYA1	636 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	CLP1	Q92989	425 aa	Known RBP	12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	FAM167A	Q96KS9	214 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	AIFM3	Q96NN9	605 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	DISC1	Q9NRI5	854 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	PADI3	Q9ULW8	664 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	CEP131	Q9UPN4	1083 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	TRPV2	Q9Y5S1	764 aa		12.12	□□□□□ -0.47
TPM2-208	ENST00000607559	PTPRS	Q13332	1948 aa		12.11	□□□□□ -0.47
TPM2-208	ENST00000607559	DDX39A	O00148	427 aa	Known RBP	12.11	□□□□□ -0.47
TPM2-208	ENST00000607559	TBX3	O15119	743 aa		12.11	□□□□□ -0.47
TPM2-208	ENST00000607559	STBD1	O95210	358 aa		12.11	□□□□□ -0.47
TPM2-208	ENST00000607559	RB1	P06400	928 aa		12.11	□□□□□ -0.47
TPM2-208	ENST00000607559	GCFC2	P16383	781 aa	Known RBP	12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms