RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 MPHOSPH6Q99547 160 aaKnown RBP4.2□□□□□ -1.74
ZEB1-224ENST00000606161 TARS2Q9BW92 718 aaKnown RBP4.2□□□□□ -1.74
ZEB1-224ENST00000606161 SCAND2PQ9GZW5 306 aaPredicted RBP4.2□□□□□ -1.74
ZEB1-224ENST00000606161 PUS7LQ9H0K6 701 aaKnown RBP4.2□□□□□ -1.74
ZEB1-224ENST00000606161 TMEM168Q9H0V1 697 aa4.2□□□□□ -1.74
ZEB1-224ENST00000606161 SMOC1Q9H4F8 434 aa4.2□□□□□ -1.74
ZEB1-224ENST00000606161 L2HGDHQ9H9P8 463 aa4.2□□□□□ -1.74
ZEB1-224ENST00000606161 ZIM2Q9NZV7 527 aa4.2□□□□□ -1.74
ZEB1-224ENST00000606161 GSG1L2A8MUP6 293 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 PRODHO43272 600 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 SH3BP5O60239 455 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 ASLP04424 464 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 PYGMP11217 842 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 FGFR1P11362 822 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 GABREP78334 506 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 R3HDM1Q15032 1099 aaKnown RBP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 DHCR24Q15392 516 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 MAP9Q49MG5 647 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 HABP4Q5JVS0 413 aaKnown RBP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 TRMT10BQ6PF06 316 aaKnown RBP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 KCNT2Q6UVM3 1135 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 KSR2Q6VAB6 950 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 USP53Q70EK8 1073 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 SPATS2Q86XZ4 545 aaKnown RBP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 KBTBD2Q8IY47 623 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 SLC16A11Q8NCK7 471 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 CHST13Q8NET6 341 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 OR2W6PQ8NHA6 318 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 PHOSPHO1Q8TCT1 267 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 KCTD13Q8WZ19 329 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 KISS1RQ969F8 398 aaPredicted RBP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 CHMP4CQ96CF2 233 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 SMAD5Q99717 465 aaKnown RBP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 PHF20Q9BVI0 1012 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.19□□□□□ -1.74
ZEB1-224ENST00000606161 SLC6A20Q9NP91 592 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 ARHGEF4Q9NR80 690 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 GPR27Q9NS67 375 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 NDOR1Q9UHB4 597 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 TSC22D4Q9Y3Q8 395 aa4.19□□□□□ -1.74
ZEB1-224ENST00000606161 SHTN1A0MZ66 631 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 PATE3B3GLJ2 98 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 NKRFO15226 690 aaKnown RBP eCLIP4.18□□□□□ -1.74
ZEB1-224ENST00000606161 ZEB2O60315 1214 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 KATNA1O75449 491 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 CNOT4O95628 575 aaKnown RBP4.18□□□□□ -1.74
ZEB1-224ENST00000606161 SCGB1D2O95969 90 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 NBPF7P0C2Y1 421 aaPredicted RBP4.18□□□□□ -1.74
ZEB1-224ENST00000606161 PABPC1P11940 636 aaKnown RBP4.18□□□□□ -1.74
ZEB1-224ENST00000606161 IGFALSP35858 605 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 RAB27AP51159 221 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 PPP2CBP62714 309 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 PPP2CAP67775 309 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 NFATC3Q12968 1075 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 RALBP1Q15311 655 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 SURF1Q15526 300 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 VPS72Q15906 364 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 CFAP100Q494V2 611 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 CYP4F22Q6NT55 531 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 OTOP3Q7RTS5 596 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 PLEKHH3Q7Z736 793 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 KLHL36Q8N4N3 616 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 AFAP1L2Q8N4X5 818 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 SH3RF3Q8TEJ3 882 aaPredicted RBP4.18□□□□□ -1.74
ZEB1-224ENST00000606161 OSBP2Q969R2 916 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 NAP1L4Q99733 375 aaKnown RBP4.18□□□□□ -1.74
ZEB1-224ENST00000606161 KLC2Q9H0B6 622 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 IFT22Q9H7X7 185 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 ZNF180Q9UJW8 692 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 ADAM29Q9UKF5 820 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 RB1CC1Q8TDY2 1594 aa4.18□□□□□ -1.74
ZEB1-224ENST00000606161 BLACEA4D250 179 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 NPEPPSL1A6NEC2 478 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 B4GALT4O60513 344 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 LDHAP00338 332 aaKnown RBP4.17□□□□□ -1.74
ZEB1-224ENST00000606161 KNG1P01042 644 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 FSHBP01225 129 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 COL6A2P12110 1019 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 C6P13671 934 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 GRK2P25098 689 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 GRK3P35626 688 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 MCL1Q07820 350 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 TUSC3Q13454 348 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 MLC1Q15049 377 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 YOD1Q5VVQ6 348 aaPredicted RBP4.17□□□□□ -1.74
ZEB1-224ENST00000606161 IQSEC1Q6DN90 963 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 ZNF585AQ6P3V2 769 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 CRIP3Q6Q6R5 217 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 LBX2Q6XYB7 198 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 DDX53Q86TM3 631 aaKnown RBP4.17□□□□□ -1.74
ZEB1-224ENST00000606161 C11orf74Q86VG3 221 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 TICAM2Q86XR7 235 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 UHMK1Q8TAS1 419 aaKnown RBP4.17□□□□□ -1.74
ZEB1-224ENST00000606161 EXOC2Q96KP1 924 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 CAMKK2Q96RR4 588 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 WRNIP1Q96S55 665 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 DLL4Q9NR61 685 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 FTSJ1Q9UET6 329 aa4.17□□□□□ -1.74
ZEB1-224ENST00000606161 RCAN3Q9UKA8 241 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms