RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SEPT9Q9UHD8 586 aaPredicted RBP15.53■□□□□ 0.08
RNF40-212ENST00000602784 CFAP45Q9UL16 551 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 SRPRBQ9Y5M8 271 aaKnown RBP15.53■□□□□ 0.08
RNF40-212ENST00000602784 MED24O75448 989 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 C22orf31O95567 290 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 SELPP16109 830 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 CYP2C18P33260 490 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 CCT6AP40227 531 aaKnown RBP15.52■□□□□ 0.08
RNF40-212ENST00000602784 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 TRMT1LQ7Z2T5 733 aaKnown RBP15.52■□□□□ 0.08
RNF40-212ENST00000602784 ZNF710Q8N1W2 664 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 NME8Q8N427 588 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 TMEM199Q8N511 208 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 LINC00301Q8NCQ3 95 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 BADQ92934 168 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 WNT8BQ93098 351 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 GDF15Q99988 308 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 JPH2Q9BR39 696 aaPredicted RBP15.52■□□□□ 0.08
RNF40-212ENST00000602784 PPP1R12CQ9BZL4 782 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 CYP26B1Q9NR63 512 aa15.52■□□□□ 0.08
RNF40-212ENST00000602784 TFIP11Q9UBB9 837 aaKnown RBP15.52■□□□□ 0.08
RNF40-212ENST00000602784 FBXO2Q9UK22 296 aaPredicted RBP15.52■□□□□ 0.08
RNF40-212ENST00000602784 MYH15Q9Y2K3 1946 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 UMODL1Q5DID0 1318 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 PPP6R2O75170 966 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 IQCF3P0C7M6 154 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 BMP8BP34820 402 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 RFC2P35250 354 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 THPOP40225 353 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 MAGEA10P43363 369 aaPredicted RBP15.51■□□□□ 0.07
RNF40-212ENST00000602784 CEBPZQ03701 1054 aaKnown RBP15.51■□□□□ 0.07
RNF40-212ENST00000602784 TBC1D8BQ0IIM8 1120 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 FAM26DQ5JW98 314 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 HYIQ5T013 277 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 PRPF38BQ5VTL8 546 aaKnown RBP15.51■□□□□ 0.07
RNF40-212ENST00000602784 KIAA0319LQ8IZA0 1049 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 SNX29Q8TEQ0 813 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 CEP170P1Q96L14 293 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 MMTAG2Q9BU76 263 aaKnown RBP15.51■□□□□ 0.07
RNF40-212ENST00000602784 WNT8AQ9H1J5 351 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 DBR1Q9UK59 544 aaKnown RBP15.51■□□□□ 0.07
RNF40-212ENST00000602784 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
RNF40-212ENST00000602784 LTBP2Q14767 1821 aa15.51■□□□□ 0.07
RNF40-212ENST00000602784 IGKV6-21A0A0C4DH24 114 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 TMEM150BA6NC51 233 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 RSPH10B2B2RC85 870 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 ZBTB39O15060 712 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 SPTLC2O15270 562 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 MAFO75444 373 aaPredicted RBP15.5■□□□□ 0.07
RNF40-212ENST00000602784 RSPH10BP0C881 870 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 TMOD1P28289 359 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 MARCKSP29966 332 aaPredicted RBP15.5■□□□□ 0.07
RNF40-212ENST00000602784 RFC5P40937 340 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 NPEPPSP55786 919 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 DNM1Q05193 864 aaKnown RBP15.5■□□□□ 0.07
RNF40-212ENST00000602784 FPGSQ05932 587 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 PPIGQ13427 754 aaKnown RBP eCLIP15.5■□□□□ 0.07
RNF40-212ENST00000602784 STK38Q15208 465 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 MTERF2Q49AM1 385 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 XKR9Q5GH70 373 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 ZNF618Q5T7W0 954 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 IER5Q5VY09 327 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 TRAF7Q6Q0C0 670 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 LRRC8DQ7L1W4 858 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 LINC01465Q8N7H1 131 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 KRI1Q8N9T8 703 aaKnown RBP15.5■□□□□ 0.07
RNF40-212ENST00000602784 KCNG4Q8TDN1 519 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 DNAJB3Q8WWF6 145 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 NT5C3AQ9H0P0 336 aa15.5■□□□□ 0.07
RNF40-212ENST00000602784 DHX33Q9H6R0 707 aaKnown RBP15.5■□□□□ 0.07
RNF40-212ENST00000602784 RBM19Q9Y4C8 960 aaKnown RBP15.5■□□□□ 0.07
RNF40-212ENST00000602784 KDM3AQ9Y4C1 1321 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 PP2D1A8MPX8 630 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 GAS2O43903 313 aaKnown RBP15.49■□□□□ 0.07
RNF40-212ENST00000602784 CDC25AP30304 524 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 UBA7P41226 1012 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 RARRES1P49788 294 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 DNM2P50570 870 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 CCL23P55773 120 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 CDC42EP1Q00587 391 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 MDM2Q00987 491 aaPredicted RBP15.49■□□□□ 0.07
RNF40-212ENST00000602784 PLA2G4FQ68DD2 849 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 EFCAB12Q6NXP0 572 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 POTEGQ6S5H5 508 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 RPUSD2Q8IZ73 545 aaKnown RBP15.49■□□□□ 0.07
RNF40-212ENST00000602784 METTL13Q8N6R0 699 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 ZNF579Q8NAF0 562 aaKnown RBP15.49■□□□□ 0.07
RNF40-212ENST00000602784 PIGOQ8TEQ8 1089 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 SLC7A3Q8WY07 619 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 CCSER1Q9C0I3 900 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 TSHZ2Q9NRE2 1034 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 RCOR1Q9UKL0 485 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 KIAA1024Q9UPX6 916 aa15.49■□□□□ 0.07
RNF40-212ENST00000602784 PFKMP08237 780 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 CSF2RAP15509 400 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 KRT85P78386 507 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 MRPS6P82932 125 aaKnown RBP15.48■□□□□ 0.07
RNF40-212ENST00000602784 GRIN1Q05586 938 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 ECM1Q16610 540 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms