RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SLC39A2Q9NP94 309 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 IGKV6D-21A0A0A0MT36 114 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 TCF7P36402 384 aaPredicted RBP19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 RGS2P41220 211 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 STX17P56962 302 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 ACVR2BQ13705 512 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 GIMAP8Q8ND71 665 aaPredicted RBP19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 BPIFA3Q9BQP9 254 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 HSD3B7Q9H2F3 369 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 PANK4Q9NVE7 773 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 TBC1D7Q9P0N9 293 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 MGAMO43451 1857 aa19.25■□□□□ 0.67
PPFIA3-207ENST00000602716 PVALEFA0A1B0GWK0 134 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 FRMD3A2A2Y4 597 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 ARHGEF35A5YM69 484 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 IGHA2P01877 340 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 KRT18P05783 430 aaKnown RBP19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 SMPD1P17405 629 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 FCGRTP55899 365 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 PRKCZQ05513 592 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 DHX37Q8IY37 1157 aaKnown RBP19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 SPATA33Q96N06 139 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 NAT10Q9H0A0 1025 aaKnown RBP19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 CTIFO43310 598 aaKnown RBP19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 USO1O60763 962 aaKnown RBP19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 KCNV1Q6PIU1 500 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 PADI6Q6TGC4 694 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 LRRC8AQ8IWT6 810 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 DAW1Q8N136 415 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 ATP6V0A1Q93050 837 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 ZHX3Q9H4I2 956 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 ZNF302Q9NR11 478 aa19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 DBR1Q9UK59 544 aaKnown RBP19.24■□□□□ 0.67
PPFIA3-207ENST00000602716 SFI1A8K8P3 1242 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 MAP2K2P36507 400 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 MAPK7Q13164 816 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 LRRC41Q15345 812 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 MAEAQ7L5Y9 396 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 ADSSL1Q8N142 457 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 KCTD17Q8N5Z5 321 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 LRRC27Q9C0I9 530 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 ABHD16BQ9H3Z7 469 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 SLC5A4Q9NY91 659 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 PCDHA2Q9Y5H9 948 aa19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 MAFBQ9Y5Q3 323 aaPredicted RBP19.23■□□□□ 0.67
PPFIA3-207ENST00000602716 SYNRGQ9UMZ2 1314 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 TRIM49BA6NDI0 452 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 CASP5P51878 434 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 IRX5P78411 483 aaPredicted RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 SEPT1Q8WYJ6 367 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 C16orf45Q96MC5 204 aaPredicted RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 SEPT9Q9UHD8 586 aaPredicted RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 HTTP42858 3142 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 FLT3LGP49771 235 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 SP3Q02447 781 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 HSP90AA4PQ58FG1 418 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 XKR9Q5GH70 373 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 MSL3Q8N5Y2 521 aaKnown RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 CD99L2Q8TCZ2 262 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 TRIB2Q92519 343 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 PKNOX2Q96KN3 472 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 CCDC94Q9BW85 323 aaPredicted RBP19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 CFHR5Q9BXR6 569 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 GPRC5CQ9NQ84 441 aa19.22■□□□□ 0.67
PPFIA3-207ENST00000602716 WDR81Q562E7 1941 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 NOP56O00567 594 aaKnown RBP19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 MARK3P27448 753 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 SOX10P56693 466 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 MYL5Q02045 173 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 FAM26FQ5R3K3 315 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 OLFML2BQ68BL8 750 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 AFG1LQ8WV93 481 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 NELFBQ8WX92 580 aa19.21■□□□□ 0.67
PPFIA3-207ENST00000602716 HIP1RO75146 1068 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 GH1P01241 217 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 OATP04181 439 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 TRIM32Q13049 653 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 ARID5BQ14865 1188 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 HERC4Q5GLZ8 1057 aaPredicted RBP19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 CCDC65Q8IXS2 484 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 TRPV1Q8NER1 839 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 DACH1Q9UI36 760 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 SMTNL1A8MU46 457 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 TNNT1P13805 278 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 DUSP28Q4G0W2 176 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 CCDC47Q96A33 483 aaKnown RBP19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 ANKEF1Q9NU02 776 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 CENPFP49454 3210 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 ARID2Q68CP9 1835 aa19.2■□□□□ 0.66
PPFIA3-207ENST00000602716 IKBKBO14920 756 aa19.19■□□□□ 0.66
PPFIA3-207ENST00000602716 TBCAO75347 108 aaKnown RBP19.19■□□□□ 0.66
PPFIA3-207ENST00000602716 LGR5O75473 907 aa19.19■□□□□ 0.66
PPFIA3-207ENST00000602716 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
PPFIA3-207ENST00000602716 ERCC5P28715 1186 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms