RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MCM10Q7L590 875 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 VASH1Q7L8A9 365 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 NPLOC4Q8TAT6 608 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CCDC127Q96BQ5 260 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 TTC1Q99614 292 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 HEPHQ9BQS7 1158 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 RAB17Q9H0T7 212 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 GLT8D2Q9H1C3 349 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CNGB3Q9NQW8 809 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 THAP1Q9NVV9 213 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CYP39A1Q9NYL5 469 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 SLC12A6Q9UHW9 1150 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 TLL2Q9Y6L7 1015 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 SH3PXD2BA1X283 911 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 GNAT3A8MTJ3 354 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 SPATA31D3P0C874 917 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PIM1P11309 404 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PDCP20941 246 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CHKAP35790 457 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ARFIP2P53365 341 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PFKPQ01813 784 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PLCB3Q01970 1234 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 GALNT1Q10472 559 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 HLTFQ14527 1009 aaKnown RBP eCLIP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PCSK7Q16549 785 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 Q3C1V9 767 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 SPATA31D4Q6ZUB0 917 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 MARK2Q7KZI7 788 aaKnown RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 VPS52Q8N1B4 723 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PAF1Q8N7H5 531 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 SLAIN1Q8ND83 568 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CFAP36Q96G28 342 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 SHCBP1LQ9BZQ2 653 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 DNAI2Q9GZS0 605 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 PSTPIP2Q9H939 334 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 TCP11L1Q9NUJ3 509 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ARMC1Q9NVT9 282 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 GID8Q9NWU2 228 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 TRIM17Q9Y577 477 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ADCY9O60503 1353 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 MROH1Q8NDA8 1641 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 SIGLEC16A6NMB1 481 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 CCDC169A6NNP5 214 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 ORC4O43929 436 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 ZC3H11AO75152 810 aaKnown RBP eCLIP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 ALDH1L1O75891 902 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 OLFM2O95897 454 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 TPBGLP0DKB5 382 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 DRD4P21917 467 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 RRM1P23921 792 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 SERPINB3P29508 390 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 HOXC13P31276 330 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 CENPAP49450 140 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 MTHFSP49914 203 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 FANCCQ00597 558 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 MRPL28Q13084 256 aaKnown RBP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 NFE2L1Q14494 772 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 GPR162Q16538 588 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 PARP6Q2NL67 630 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 FAM173BQ6P4H8 233 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 LONP2Q86WA8 852 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 SNX32Q86XE0 403 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 HACE1Q8IYU2 909 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 AADATQ8N5Z0 425 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 FAM133AQ8N9E0 248 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 PTCD2Q8WV60 388 aaKnown RBP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 TMA16Q96EY4 203 aaKnown RBP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 ZSCAN31Q96LW9 406 aaPredicted RBP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 DNAJC18Q9H819 358 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 METTL5Q9NRN9 209 aaKnown RBP9.55□□□□□ -0.88
COMMD3-215ENST00000602574 MRGBPQ9NV56 204 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 HMGXB4Q9UGU5 601 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 TACC3Q9Y6A5 838 aa9.55□□□□□ -0.88
COMMD3-215ENST00000602574 CENPBD1B2RD01 187 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 LGR5O75473 907 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 MAP3K6O95382 1288 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 RBP3P10745 1247 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 COL6A2P12110 1019 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 DDX5P17844 614 aaKnown RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 SDSP20132 328 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 GNA11P29992 359 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 BLVRAP53004 296 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 TTLL12Q14166 644 aaPredicted RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 GALNTL6Q49A17 601 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 FYB2Q5VWT5 728 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 KIAA1841Q6NSI8 718 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 LRIG3Q6UXM1 1119 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 SLC30A10Q6XR72 485 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 TRAPPC11Q7Z392 1133 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 BRF1Q92994 677 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 OSBP2Q969R2 916 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 CTRCQ99895 268 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms