RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 PDE12Q6L8Q7 609 aaKnown RBP18.37■□□□□ 0.53
SSBP4-211ENST00000601614 MTHFD1LQ6UB35 978 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 FRMD5Q7Z6J6 570 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 MRPS27Q92552 414 aaKnown RBP18.37■□□□□ 0.53
SSBP4-211ENST00000601614 MYL10Q9BUA6 226 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 SPZ1Q9BXG8 430 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 JADE2Q9NQC1 790 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 RGS18Q9NS28 235 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
SSBP4-211ENST00000601614 ASGR2P07307 311 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 PDE4AP27815 886 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 PBX3P40426 434 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 ANTXR2P58335 489 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 PLCB3Q01970 1234 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 LRRC55Q6ZSA7 311 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 SLC24A5Q71RS6 500 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 UBALD2Q8IYN6 164 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 JPH1Q9HDC5 661 aaPredicted RBP18.36■□□□□ 0.53
SSBP4-211ENST00000601614 ENTPD7Q9NQZ7 604 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 RNF19AQ9NV58 838 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 SLC9A2Q9UBY0 812 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
SSBP4-211ENST00000601614 HIP1O00291 1037 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 RPS6KA5O75582 802 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 WEE2P0C1S8 567 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 SRGAP2BP0DMP2 458 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-211ENST00000601614 ERMP1Q7Z2K6 904 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 CYP2W1Q8TAV3 490 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
SSBP4-211ENST00000601614 PPP1R16BQ96T49 567 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 ST3GAL5Q9UNP4 418 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 NR2E1Q9Y466 385 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 HCFC2Q9Y5Z7 792 aa18.35■□□□□ 0.53
SSBP4-211ENST00000601614 MYH9P35579 1960 aaKnown RBP18.34■□□□□ 0.53
SSBP4-211ENST00000601614 WDR81Q562E7 1941 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 DENND3A2RUS2 1198 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 PLEKHA8P1O95397 391 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 LAG3P18627 525 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 ID4P47928 161 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 STAT5BP51692 787 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 ACTR2P61160 394 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 PTH1RQ03431 593 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 TRDNQ13061 729 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 ASTLQ6HA08 431 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-211ENST00000601614 PLPPR4Q7Z2D5 763 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 KIAA0319LQ8IZA0 1049 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
SSBP4-211ENST00000601614 NME8Q8N427 588 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 NKD2Q969F2 451 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-211ENST00000601614 AZI2Q9H6S1 392 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 PSTPIP2Q9H939 334 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 KCNH7Q9NS40 1196 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 C1orf112Q9NSG2 853 aa18.34■□□□□ 0.53
SSBP4-211ENST00000601614 EP300Q09472 2414 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-211ENST00000601614 ERICH2A1L162 156 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 KLRC1P26715 233 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 FAM189BP81408 668 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 DSC3Q14574 896 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 CWF19L1Q69YN2 538 aaKnown RBP18.33■□□□□ 0.52
SSBP4-211ENST00000601614 KANK3Q6NY19 840 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 KCNT2Q6UVM3 1135 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 CATIPQ7Z7H3 387 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 SRBD1Q8N5C6 995 aaKnown RBP18.33■□□□□ 0.52
SSBP4-211ENST00000601614 CASD1Q96PB1 797 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 ADAM7Q9H2U9 754 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 TMEM161AQ9NX61 479 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 PCDHA6Q9UN73 950 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 PCDHA8Q9Y5H6 950 aa18.33■□□□□ 0.52
SSBP4-211ENST00000601614 C2orf16Q68DN1 1984 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 E7EWF7 191 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 MAFGO15525 162 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 ITGB3BPQ13352 177 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-211ENST00000601614 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 CASP10Q92851 521 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 ATP6V0A4Q9HBG4 840 aa18.32■□□□□ 0.52
SSBP4-211ENST00000601614 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
SSBP4-211ENST00000601614 C2orf71A6NGG8 1288 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 PI15O43692 258 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 ATG7O95352 703 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 TMC7Q7Z402 723 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-211ENST00000601614 C12orf76Q8N812 135 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-211ENST00000601614 OSMRQ99650 979 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 MXRA8Q9BRK3 442 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 TMEM117Q9H0C3 514 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 ELAC1Q9H777 363 aaKnown RBP18.31■□□□□ 0.52
SSBP4-211ENST00000601614 LY9Q9HBG7 655 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 LIMD1Q9UGP4 676 aa18.31■□□□□ 0.52
SSBP4-211ENST00000601614 SEC63Q9UGP8 760 aaKnown RBP18.31■□□□□ 0.52
SSBP4-211ENST00000601614 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
SSBP4-211ENST00000601614 ZNF292O60281 2723 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms