RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 GRIN1Q05586 938 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 RESP18Q5W5W9 173 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 KRT79Q5XKE5 535 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 PSRC1Q6PGN9 363 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 PLPPR4Q7Z2D5 763 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 HERVK_113Q902F9 699 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 THEGQ9P2T0 379 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 IGSF9BQ9UPX0 1349 aa13.05□□□□□ -0.32
CHMP2A-207ENST00000600804 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 DDX39AO00148 427 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 ZEB2O60315 1214 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 SLITRK3O94933 977 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 SPATA31C1P0DKV0 1188 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 XRCC6P12956 609 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 MYOGP15173 224 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 UBA7P41226 1012 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 PSMC5P62195 406 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 SHC4Q6S5L8 630 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 NECAB3Q96P71 396 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 ASB2Q96Q27 587 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 EIF2AK1Q9BQI3 630 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 NT5C3AQ9H0P0 336 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 GDPD2Q9HCC8 539 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 KDM3AQ9Y4C1 1321 aa13.04□□□□□ -0.32
CHMP2A-207ENST00000600804 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 CHMP2AO43633 222 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 CABYRO75952 493 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 F2P00734 622 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 LGALS2P05162 132 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 TXLNAP40222 546 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 RABGGTBP53611 331 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 CCL23P55773 120 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 UBE2HP62256 183 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 PSMC6P62333 389 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 OTOP2Q7RTS6 562 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 CATSPER3Q86XQ3 398 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 SNX29Q8TEQ0 813 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 FAM167AQ96KS9 214 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 UIMC1Q96RL1 719 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 PCYT2Q99447 389 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 TRPV6Q9H1D0 765 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 ZSWIM4Q9H7M6 989 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 SAMM50Q9Y512 469 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 ATG2AQ2TAZ0 1938 aa13.03□□□□□ -0.32
CHMP2A-207ENST00000600804 SIP14410 1827 aa13.02□□□□□ -0.32
CHMP2A-207ENST00000600804 GOLGA6L4A6NEF3 574 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 B4GALT4O60513 344 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 STAT5BP51692 787 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 ITGA7Q13683 1181 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 TMEM119Q4V9L6 283 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 SWSAP1Q6NVH7 229 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 CABP7Q86V35 215 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 SCLYQ96I15 445 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 EPSTI1Q96J88 318 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 LXNQ9BS40 222 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 SEZ6LQ9BYH1 1024 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 HIPK3Q9H422 1215 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 FAM13BQ9NYF5 915 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 ERAP1Q9NZ08 941 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 PPME1Q9Y570 386 aa13.02□□□□□ -0.33
CHMP2A-207ENST00000600804 PP2D1A8MPX8 630 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 HAS3O00219 553 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 MED24O75448 989 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 STBD1O95210 358 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 FGBP02675 491 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 IGFBP4P22692 258 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 CCT6AP40227 531 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms