RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 COL4A6Q14031 1691 aa17.71■□□□□ 0.43
RPS28-203ENST00000600659 TTC3P53804 2025 aa17.71■□□□□ 0.43
RPS28-203ENST00000600659 ATP2B1P20020 1258 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 TRAPPC10P48553 1259 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 PSMC5P62195 406 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 TTC38Q5R3I4 469 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 ANO5Q75V66 913 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 NIFKQ9BYG3 293 aaKnown RBP17.71■□□□□ 0.42
RPS28-203ENST00000600659 AGO3Q9H9G7 860 aaKnown RBP17.71■□□□□ 0.42
RPS28-203ENST00000600659 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 RGL1Q9NZL6 768 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.42
RPS28-203ENST00000600659 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.42
RPS28-203ENST00000600659 IGKV6-21A0A0C4DH24 114 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 RPLP2P05387 115 aaKnown RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 P4HBP07237 508 aaKnown RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 GHRP10912 638 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 QARSP47897 775 aaKnown RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 CLCN3P51790 818 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 RABGGTBP53611 331 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 ORC2Q13416 577 aaPredicted RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 ZNF174Q15697 407 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 XKR3Q5GH77 459 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 RSPH3Q86UC2 560 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 TMEM40Q8WWA1 233 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 GUCD1Q96NT3 240 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 SLC9A7Q96T83 725 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 SH2D3AQ9BRG2 576 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 LXNQ9BS40 222 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 TTC12Q9H892 705 aaPredicted RBP17.7■□□□□ 0.42
RPS28-203ENST00000600659 CDHR5Q9HBB8 845 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 CEP131Q9UPN4 1083 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 PCDHB6Q9Y5E3 794 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 TRPV2Q9Y5S1 764 aa17.7■□□□□ 0.42
RPS28-203ENST00000600659 EYSQ5T1H1 3165 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 TMEM265A0A087WTH1 108 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 ABHD14A-ACY1A0A1B0GW23 586 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 POTEMA6NI47 508 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
RPS28-203ENST00000600659 SLITRK3O94933 977 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 ARHGEF15O94989 841 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 BAG4O95429 457 aaKnown RBP17.69■□□□□ 0.42
RPS28-203ENST00000600659 MYOGP15173 224 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 TXKP42681 527 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 DRP2Q13474 957 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
RPS28-203ENST00000600659 C4orf19Q8IY42 314 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 NME8Q8N427 588 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 LRRC71Q8N4P6 559 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 DEFB123Q8N688 67 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 ZNF579Q8NAF0 562 aaKnown RBP17.69■□□□□ 0.42
RPS28-203ENST00000600659 PHOSPHO2Q8TCD6 241 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 SNX21Q969T3 373 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 DYDC2Q96IM9 177 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 HSD17B14Q9BPX1 270 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 IFIH1Q9BYX4 1025 aaKnown RBP17.69■□□□□ 0.42
RPS28-203ENST00000600659 NRBP2Q9NSY0 501 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 SEPT9Q9UHD8 586 aaPredicted RBP17.69■□□□□ 0.42
RPS28-203ENST00000600659 PCDHA12Q9UN75 941 aa17.69■□□□□ 0.42
RPS28-203ENST00000600659 GPR32O75388 356 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 CYP4A11Q02928 519 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 CTTNQ14247 550 aaKnown RBP17.68■□□□□ 0.42
RPS28-203ENST00000600659 PLA2G4FQ68DD2 849 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 TSHZ1Q6ZSZ6 1077 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 HERC6Q8IVU3 1022 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 LINC01599Q8WXQ3 324 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 SEPT8Q92599 483 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 TIFAQ96CG3 184 aa17.68■□□□□ 0.42
RPS28-203ENST00000600659 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
RPS28-203ENST00000600659 CELF4Q9BZC1 486 aaKnown RBP17.68■□□□□ 0.42
RPS28-203ENST00000600659 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.68■□□□□ 0.42
RPS28-203ENST00000600659 MYH15Q9Y2K3 1946 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 ZBTB39O15060 712 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 MAGEB2O15479 319 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 MARCH6O60337 910 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 VTNP04004 478 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 OR52Z1P0C646 297 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 NPEPPSP55786 919 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 IKBKEQ14164 716 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 MTERF2Q49AM1 385 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 IER5Q5VY09 327 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 INTS4Q96HW7 963 aaKnown RBP17.67■□□□□ 0.42
RPS28-203ENST00000600659 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 SEMA6BQ9H3T3 888 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 PCDHA11Q9Y5I1 949 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 SQORQ9Y6N5 450 aa17.67■□□□□ 0.42
RPS28-203ENST00000600659 EFCAB14O75071 495 aa17.66■□□□□ 0.42
RPS28-203ENST00000600659 LYPLA2O95372 231 aa17.66■□□□□ 0.42
RPS28-203ENST00000600659 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
RPS28-203ENST00000600659 CD52P31358 61 aa17.66■□□□□ 0.42
RPS28-203ENST00000600659 GNL2Q13823 731 aaKnown RBP17.66■□□□□ 0.42
RPS28-203ENST00000600659 RAB30Q15771 203 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms