RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 SERINC5Q86VE9 423 aa23.15■■□□□ 1.3
GTPBP3-221ENST00000600610 CAGE1Q8TC20 777 aa23.15■■□□□ 1.3
GTPBP3-221ENST00000600610 LMBR1Q8WVP7 490 aa23.15■■□□□ 1.3
GTPBP3-221ENST00000600610 FTOQ9C0B1 505 aaKnown RBP eCLIP23.15■■□□□ 1.3
GTPBP3-221ENST00000600610 CCSER1Q9C0I3 900 aa23.15■■□□□ 1.3
GTPBP3-221ENST00000600610 SETD4Q9NVD3 440 aa23.15■■□□□ 1.3
GTPBP3-221ENST00000600610 CUTAO60888 179 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 TIMP1P01033 207 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 YWHABP31946 246 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 CCT6AP40227 531 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 CYP4A11Q02928 519 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 BFSP2Q13515 415 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 CTTNQ14247 550 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 TARBP2Q15633 366 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 NME8Q8N427 588 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 SNX29Q8TEQ0 813 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 TUBE1Q9UJT0 475 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 DBR1Q9UK59 544 aaKnown RBP23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 PCDHA2Q9Y5H9 948 aa23.14■■□□□ 1.29
GTPBP3-221ENST00000600610 DDX11L8A8MPP1 907 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 PITPNM1O00562 1244 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 GAS2O43903 313 aaKnown RBP23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 PARNO95453 639 aaKnown RBP23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 MARCKSP29966 332 aaPredicted RBP23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 TXLNAP40222 546 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 FAM43BQ6ZT52 329 aaPredicted RBP23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 ANO5Q75V66 913 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 RETREG2Q8NC44 543 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 BADQ92934 168 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 CALML4Q96GE6 196 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 UBE2OQ9C0C9 1292 aaKnown RBP23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 TRPV6Q9H1D0 765 aa23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 TRMT13Q9NUP7 481 aaKnown RBP23.13■■□□□ 1.29
GTPBP3-221ENST00000600610 SMIM35A0A1B0GVV1 85 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 ZBTB42B2RXF5 422 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 MED24O75448 989 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 RFC5P40937 340 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 CDC42EP1Q00587 391 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 MARCH8Q5T0T0 291 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 MTHFD1LQ6UB35 978 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 RSPH3Q86UC2 560 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 SPATA32Q96LK8 384 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 CYP26B1Q9NR63 512 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 SEPT9Q9UHD8 586 aaPredicted RBP23.12■■□□□ 1.29
GTPBP3-221ENST00000600610 TREHO43280 583 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 ITGB8P26012 769 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 KLRC1P26715 233 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 TMOD1P28289 359 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 TBC1D8BQ0IIM8 1120 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 MFSD5Q6N075 450 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 CABP7Q86V35 215 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 CDK5RAP3Q96JB5 506 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 CTAGE1Q96RT6 745 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 MMTAG2Q9BU76 263 aaKnown RBP23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 CSRNP2Q9H175 543 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 WRAP73Q9P2S5 460 aaPredicted RBP23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 DNM3Q9UQ16 869 aa23.11■■□□□ 1.29
GTPBP3-221ENST00000600610 MAFO75444 373 aaPredicted RBP23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 NCLP19338 710 aaKnown RBP23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 LEO1Q8WVC0 666 aaPredicted RBP23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 CEP170P1Q96L14 293 aa23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 CCDC43Q96MW1 224 aaKnown RBP23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 CEP89Q96ST8 783 aa23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 KIAA1024Q9UPX6 916 aa23.1■■□□□ 1.29
GTPBP3-221ENST00000600610 IGKV6-21A0A0C4DH24 114 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 DGAT1O75907 488 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 C22orf31O95567 290 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 CYP2C9P11712 490 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 ME1P48163 572 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 DNM2P50570 870 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 HIC1Q14526 733 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 CSPP1Q1MSJ5 1256 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 FOXD4L6Q3SYB3 417 aaPredicted RBP23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 XKR9Q5GH70 373 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 ADALQ6DHV7 355 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 FOXD4L3Q6VB84 417 aaPredicted RBP23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 TDHQ8IZJ6 230 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 TMEM199Q8N511 208 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 SLC7A3Q8WY07 619 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 PYM1Q9BRP8 204 aaKnown RBP23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 HIPK3Q9H422 1215 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 DDX19AQ9NUU7 478 aaKnown RBP23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 TANC1Q9C0D5 1861 aa23.09■■□□□ 1.29
GTPBP3-221ENST00000600610 EYA4O95677 639 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 RARRES1P49788 294 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 IGBP1P78318 339 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 FPGSQ05932 587 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 MTERF2Q49AM1 385 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 AXDND1Q5T1B0 1012 aaPredicted RBP23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 NOC4LQ9BVI4 516 aaKnown RBP23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 DHX33Q9H6R0 707 aaKnown RBP23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 KCND2Q9NZV8 630 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 PCDHA7Q9UN72 937 aa23.08■■□□□ 1.29
GTPBP3-221ENST00000600610 PP2D1A8MPX8 630 aa23.07■■□□□ 1.28
GTPBP3-221ENST00000600610 CDC25AP30304 524 aa23.07■■□□□ 1.28
GTPBP3-221ENST00000600610 RFC2P35250 354 aa23.07■■□□□ 1.28
GTPBP3-221ENST00000600610 ZNF200P98182 395 aaPredicted RBP23.07■■□□□ 1.28
GTPBP3-221ENST00000600610 GRIN1Q05586 938 aa23.07■■□□□ 1.28
GTPBP3-221ENST00000600610 TRIM71Q2Q1W2 868 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms