RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TMX1Q9H3N1 280 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 DOCK5Q9H7D0 1870 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 RNF225M0QZC1 329 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-218ENST00000600383 CLIC2O15247 247 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 OFD1O75665 1012 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 COPB2P35606 906 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 KLK7P49862 253 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 ZNF131P52739 623 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 SYCP1Q15431 976 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 CST9Q5W186 159 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 MIS18BP1Q6P0N0 1132 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 CCDC60Q8IWA6 550 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-218ENST00000600383 DAW1Q8N136 415 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 ATP6V0A1Q93050 837 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 C16orf45Q96MC5 204 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-218ENST00000600383 NDST4Q9H3R1 872 aa16.73■□□□□ 0.27
HIF3A-218ENST00000600383 CETN3O15182 167 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 CALUO43852 315 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-218ENST00000600383 ZNF862O60290 1169 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 ICAM3P32942 547 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 MAPK7Q13164 816 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 ABHD15Q6UXT9 468 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 OTUD6AQ7L8S5 288 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 CEP170P1Q96L14 293 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
HIF3A-218ENST00000600383 GPRC5CQ9NQ84 441 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 SEL1LQ9UBV2 794 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 A0A1W2PQC6 194 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 PDXKO00764 312 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 EDNRBP24530 442 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 MAN2A1Q16706 1144 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 LY6KQ17RY6 165 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 FAM102BQ5T8I3 360 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 E4F1Q66K89 784 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-218ENST00000600383 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 CNGA4Q8IV77 575 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 CEP63Q96MT8 703 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 FIZ1Q96SL8 496 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 ANKEF1Q9NU02 776 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
HIF3A-218ENST00000600383 TRAF3IP3Q9Y228 551 aa16.72■□□□□ 0.27
HIF3A-218ENST00000600383 STX10O60499 249 aa16.71■□□□□ 0.27
HIF3A-218ENST00000600383 MFAP3LO75121 409 aa16.71■□□□□ 0.27
HIF3A-218ENST00000600383 TRIM21P19474 475 aaKnown RBP16.71■□□□□ 0.27
HIF3A-218ENST00000600383 UBA1P22314 1058 aaKnown RBP16.71■□□□□ 0.27
HIF3A-218ENST00000600383 HUNKP57058 714 aa16.71■□□□□ 0.27
HIF3A-218ENST00000600383 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-218ENST00000600383 TMEM139Q8IV31 216 aa16.71■□□□□ 0.27
HIF3A-218ENST00000600383 CCAR2Q8N163 923 aaKnown RBP16.71■□□□□ 0.27
HIF3A-218ENST00000600383 TYW1Q9NV66 732 aaKnown RBP16.71■□□□□ 0.27
HIF3A-218ENST00000600383 SEPT9Q9UHD8 586 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-218ENST00000600383 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.27
HIF3A-218ENST00000600383 TTC26A0AVF1 554 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 K7ENM7 598 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 DKC1O60832 514 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIF3A-218ENST00000600383 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-218ENST00000600383 KRT9P35527 623 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 CCNA1P78396 465 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 SYCP3Q8IZU3 236 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 PANX2Q96RD6 677 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 DNAJC25-GNG10A0A024R161 153 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIF3A-218ENST00000600383 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 GNA14O95837 355 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 SUPT20HL2P0C7V6 817 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 PRKCEQ02156 737 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 FGD4Q96M96 766 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 PTPN18Q99952 460 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 MLXIPQ9HAP2 919 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 ZNF302Q9NR11 478 aa16.7■□□□□ 0.26
HIF3A-218ENST00000600383 LUC7L2Q9Y383 392 aaKnown RBP16.7■□□□□ 0.26
HIF3A-218ENST00000600383 MYH11P35749 1972 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 TGFB1I1O43294 461 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 GGPS1O95749 300 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 ITGBL1O95965 494 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-218ENST00000600383 NR3C1P04150 777 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 PLS3P13797 630 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
HIF3A-218ENST00000600383 PEX3P56589 373 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 SOX10P56693 466 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 TRIM14Q14142 442 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 NEDD9Q14511 834 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 ANKRD23Q86SG2 305 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 MMRN2Q9H8L6 949 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 R3HCC1Q9Y3T6 440 aaKnown RBP16.69■□□□□ 0.26
HIF3A-218ENST00000600383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.69■□□□□ 0.26
HIF3A-218ENST00000600383 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 SOWAHDA6NJG2 315 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 SOCS7O14512 581 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 FARP2O94887 1054 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-218ENST00000600383 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-218ENST00000600383 TGFB3P10600 412 aa16.69■□□□□ 0.26
HIF3A-218ENST00000600383 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms