RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 TRIM71Q2Q1W2 868 aaKnown RBP21.63■■□□□ 1.05
UPF1-209ENST00000600310 KRI1Q8N9T8 703 aaKnown RBP21.63■■□□□ 1.05
UPF1-209ENST00000600310 CAGE1Q8TC20 777 aa21.63■■□□□ 1.05
UPF1-209ENST00000600310 WNT8BQ93098 351 aa21.63■■□□□ 1.05
UPF1-209ENST00000600310 IPO9Q96P70 1041 aaKnown RBP21.63■■□□□ 1.05
UPF1-209ENST00000600310 CEP89Q96ST8 783 aa21.63■■□□□ 1.05
UPF1-209ENST00000600310 CYP26B1Q9NR63 512 aa21.63■■□□□ 1.05
UPF1-209ENST00000600310 ANKEF1Q9NU02 776 aa21.63■■□□□ 1.05
UPF1-209ENST00000600310 PPME1Q9Y570 386 aa21.63■■□□□ 1.05
UPF1-209ENST00000600310 PITPNM1O00562 1244 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 ZBTB39O15060 712 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 SLC26A4O43511 780 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 C22orf31O95567 290 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 TIMP1P01033 207 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 RAG1P15918 1043 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 ITGB8P26012 769 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 KRT85P78386 507 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 MTERF2Q49AM1 385 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 HYIQ5T013 277 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 PLA2G4FQ68DD2 849 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 POTEGQ6S5H5 508 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 RUFY4Q6ZNE9 571 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 RPAINQ86UA6 219 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 CCDC155Q8N6L0 562 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 KCNG4Q8TDN1 519 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 ZBTB10Q96DT7 871 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 CEP170P1Q96L14 293 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 NACC1Q96RE7 527 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 PPP1R12CQ9BZL4 782 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 CSRNP2Q9H175 543 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 RCOR1Q9UKL0 485 aa21.62■■□□□ 1.05
UPF1-209ENST00000600310 WDR81Q562E7 1941 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 SMIM35A0A1B0GVV1 85 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 NPEPPSP55786 919 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 CHAMP1Q96JM3 812 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 CLIC6Q96NY7 704 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 SH2D3AQ9BRG2 576 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 CHMP5Q9NZZ3 219 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 KIAA1024Q9UPX6 916 aa21.61■■□□□ 1.05
UPF1-209ENST00000600310 UMODL1Q5DID0 1318 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 KDM3AQ9Y4C1 1321 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 H0YGN5 161 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 CAND2O75155 1236 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 RPLP2P05387 115 aaKnown RBP21.6■■□□□ 1.05
UPF1-209ENST00000600310 CKBP12277 381 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 CYP2C18P33260 490 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 UBA7P41226 1012 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 TBC1D8BQ0IIM8 1120 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 XKR9Q5GH70 373 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 HABP4Q5JVS0 413 aaKnown RBP21.6■■□□□ 1.05
UPF1-209ENST00000600310 CABP7Q86V35 215 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 KCTD17Q8N5Z5 321 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 ZNF579Q8NAF0 562 aaKnown RBP21.6■■□□□ 1.05
UPF1-209ENST00000600310 RETREG2Q8NC44 543 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 PIGOQ8TEQ8 1089 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 CCSER1Q9C0I3 900 aa21.6■■□□□ 1.05
UPF1-209ENST00000600310 DBR1Q9UK59 544 aaKnown RBP21.6■■□□□ 1.05
UPF1-209ENST00000600310 MYH15Q9Y2K3 1946 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 A0A087WWV3 80 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 IGKV6-21A0A0C4DH24 114 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 NCLP19338 710 aaKnown RBP21.59■■□□□ 1.05
UPF1-209ENST00000600310 THPOP40225 353 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 RARRES1P49788 294 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 RSPH3Q86UC2 560 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 LINC01465Q8N7H1 131 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 DNAJB3Q8WWF6 145 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 PNMA5Q96PV4 448 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 WNT8AQ9H1J5 351 aa21.59■■□□□ 1.05
UPF1-209ENST00000600310 DDX19AQ9NUU7 478 aaKnown RBP21.59■■□□□ 1.05
UPF1-209ENST00000600310 CUTAO60888 179 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 MAFO75444 373 aaPredicted RBP21.58■■□□□ 1.05
UPF1-209ENST00000600310 IQCF3P0C7M6 154 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 SELPP16109 830 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 RFC5P40937 340 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 GRB10Q13322 594 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 SPECC1Q5M775 1068 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 MFSD5Q6N075 450 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 EFCAB12Q6NXP0 572 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 TRAF7Q6Q0C0 670 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 USP49Q70CQ1 688 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 EXOC8Q8IYI6 725 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 KIAA0319LQ8IZA0 1049 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 NME8Q8N427 588 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 METTL13Q8N6R0 699 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 LEO1Q8WVC0 666 aaPredicted RBP21.58■■□□□ 1.05
UPF1-209ENST00000600310 BADQ92934 168 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 EPSTI1Q96J88 318 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 LBHD1Q9BQE6 289 aaPredicted RBP21.58■■□□□ 1.05
UPF1-209ENST00000600310 JPH2Q9BR39 696 aaPredicted RBP21.58■■□□□ 1.05
UPF1-209ENST00000600310 NT5C3AQ9H0P0 336 aa21.58■■□□□ 1.05
UPF1-209ENST00000600310 FAM49AQ9H0Q0 323 aaPredicted RBP21.58■■□□□ 1.05
UPF1-209ENST00000600310 DHX33Q9H6R0 707 aaKnown RBP21.58■■□□□ 1.05
UPF1-209ENST00000600310 KAT6AQ92794 2004 aa21.58■■□□□ 1.04
UPF1-209ENST00000600310 TRIP12Q14669 1992 aaPredicted RBP21.57■■□□□ 1.04
UPF1-209ENST00000600310 CCL23P55773 120 aa21.57■■□□□ 1.04
UPF1-209ENST00000600310 ZRSR1Q15695 479 aaKnown RBP21.57■■□□□ 1.04
UPF1-209ENST00000600310 TMEM119Q4V9L6 283 aa21.57■■□□□ 1.04
UPF1-209ENST00000600310 FAM26DQ5JW98 314 aa21.57■■□□□ 1.04
UPF1-209ENST00000600310 AXDND1Q5T1B0 1012 aaPredicted RBP21.57■■□□□ 1.04
UPF1-209ENST00000600310 ZNF618Q5T7W0 954 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms