RNA–Protein interactions for RNA: ENST00000600166.1

CFTR-208, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-208ENST00000600166 CPLX3Q8WVH0 158 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 DYDC1Q8WWB3 177 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 DNAJC9Q8WXX5 260 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 CAPZA3Q96KX2 299 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 RUNDC3BQ96NL0 473 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 SEC62Q99442 399 aaKnown RBP7.56□□□□□ -1.2
CFTR-208ENST00000600166 NDNQ99608 321 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 LACRTQ9GZZ8 138 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 BOLA2Q9H3K6 86 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 NCOA5Q9HCD5 579 aaKnown RBP7.56□□□□□ -1.2
CFTR-208ENST00000600166 TIMMDC1Q9NPL8 285 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 RBM12Q9NTZ6 932 aaKnown RBP7.56□□□□□ -1.2
CFTR-208ENST00000600166 USP40Q9NVE5 1235 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.56□□□□□ -1.2
CFTR-208ENST00000600166 MAGEC2Q9UBF1 373 aaPredicted RBP7.56□□□□□ -1.2
CFTR-208ENST00000600166 PRKAG3Q9UGI9 489 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 PARP2Q9UGN5 583 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 PAIP2BQ9ULR5 123 aaKnown RBP7.56□□□□□ -1.2
CFTR-208ENST00000600166 TMED5Q9Y3A6 229 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 PCDHA13Q9Y5I0 950 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 ATAD5Q96QE3 1844 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 RREB1Q92766 1687 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 MYH7BA7E2Y1 1941 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 STRCP1A6NGW2 1772 aa7.56□□□□□ -1.2
CFTR-208ENST00000600166 TIAM2Q8IVF5 1701 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 PRR36Q9H6K5 1346 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 A0A0U1RQJ8 604 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 PSMA7O14818 248 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 OPLAHO14841 1288 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 FOXO3O43524 673 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 SRGAP2O75044 1071 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 DEXIO95424 95 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ABL1P00519 1130 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 EIF2S1P05198 315 aaKnown RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 TPBGLP0DKB5 382 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 HARSP12081 509 aaKnown RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 HSPA6P17066 643 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 TRIM21P19474 475 aaKnown RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 SMARCA1P28370 1054 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ECHS1P30084 290 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 PCK1P35558 622 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 VHLP40337 213 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 RANBP1P43487 201 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 METAP2P50579 478 aaKnown RBP eCLIP7.55□□□□□ -1.2
CFTR-208ENST00000600166 MMP16P51512 607 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 NPEPPSP55786 919 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 XIAPP98170 497 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 GUCY2DQ02846 1103 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 FOXC1Q12948 553 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ALX1Q15699 326 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 SPRED3Q2MJR0 410 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ASTE1Q2TB18 679 aaPredicted RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 MEI1Q5TIA1 1274 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 TMC3Q7Z5M5 1100 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 TBC1D1Q86TI0 1168 aaPredicted RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 RAB11FIP4Q86YS3 637 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 NELFCDQ8IXH7 590 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ADSSL1Q8N142 457 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.55□□□□□ -1.2
CFTR-208ENST00000600166 GATA6Q92908 595 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 CATSPER2Q96P56 530 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 CENPKQ9BS16 269 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 PABPC3Q9H361 631 aaKnown RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 ECT2Q9H8V3 914 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 METTL14Q9HCE5 456 aaKnown RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 SAR1AQ9NR31 198 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 LNPEPQ9UIQ6 1025 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 DBNLQ9UJU6 430 aaKnown RBP7.55□□□□□ -1.2
CFTR-208ENST00000600166 ZNF232Q9UNY5 417 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 STXBP5LQ9Y2K9 1186 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 L3MBTL1Q9Y468 752 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 ACTL7BQ9Y614 415 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 CAPN6Q9Y6Q1 641 aa7.55□□□□□ -1.2
CFTR-208ENST00000600166 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 A0A0A6YYK5 440 aaPredicted RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 FAM187AA6NFU0 413 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 TRIM75PA6NK02 468 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 F8VZ95 297 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 TCEA3O75764 348 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 DXOO77932 396 aaKnown RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 TFRCP02786 760 aaKnown RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 MMEP08473 750 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 PABPC4LP0CB38 370 aaKnown RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 TROVE2P10155 538 aaKnown RBP eCLIP7.54□□□□□ -1.2
CFTR-208ENST00000600166 TMOD1P28289 359 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 YARSP54577 528 aaKnown RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 GUCY1B3Q02153 619 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 SSRP1Q08945 709 aaKnown RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 TEFQ10587 303 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 NAB2Q15742 525 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 ENOX2Q16206 610 aaKnown RBP7.54□□□□□ -1.2
CFTR-208ENST00000600166 FKBP15Q5T1M5 1219 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 KLHDC7AQ5VTJ3 777 aa7.54□□□□□ -1.2
CFTR-208ENST00000600166 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms