RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 PPP1R16BQ96T49 567 aa15.58■□□□□ 0.08
IRF3-225ENST00000600022 MTA3Q9BTC8 594 aa15.58■□□□□ 0.08
IRF3-225ENST00000600022 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
IRF3-225ENST00000600022 GINS2Q9Y248 185 aa15.58■□□□□ 0.08
IRF3-225ENST00000600022 NOC2LQ9Y3T9 749 aaKnown RBP15.58■□□□□ 0.08
IRF3-225ENST00000600022 CNTNAP5Q8WYK1 1306 aa15.58■□□□□ 0.08
IRF3-225ENST00000600022 IGSF9BQ9UPX0 1349 aa15.58■□□□□ 0.08
IRF3-225ENST00000600022 LOXHD1Q8IVV2 1947 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 MEIS1O00470 390 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 PER2O15055 1255 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 NCK2O43639 380 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 GLP2RO95838 553 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 CALM1P0DP23 149 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 CALM2P0DP24 149 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 CALM3P0DP25 149 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 ATP4AP20648 1035 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 NRIP1P48552 1158 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 NFX1Q12986 1120 aaKnown RBP15.57■□□□□ 0.08
IRF3-225ENST00000600022 TOB2Q14106 344 aaPredicted RBP15.57■□□□□ 0.08
IRF3-225ENST00000600022 FAM102BQ5T8I3 360 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 PLPPR4Q7Z2D5 763 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 SGMS1Q86VZ5 419 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 NPAS4Q8IUM7 802 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 CMTR2Q8IYT2 770 aaKnown RBP15.57■□□□□ 0.08
IRF3-225ENST00000600022 KIAA0319LQ8IZA0 1049 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 SPRYD3Q8NCJ5 442 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
IRF3-225ENST00000600022 PLVAPQ9BX97 442 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 SLKQ9H2G2 1235 aaPredicted RBP15.57■□□□□ 0.08
IRF3-225ENST00000600022 AZI2Q9H6S1 392 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 RIC8AQ9NPQ8 531 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 CD207Q9UJ71 328 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 RWDD3Q9Y3V2 267 aa15.57■□□□□ 0.08
IRF3-225ENST00000600022 IGKV6D-21A0A0A0MT36 114 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 SMIM35A0A1B0GVV1 85 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 ZBTB42B2RXF5 422 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 FAM86B1E9PN63 330 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 STXBP3O00186 592 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 DHX15O43143 795 aaKnown RBP15.56■□□□□ 0.08
IRF3-225ENST00000600022 FAM86B2P0C5J1 330 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 SCG2P13521 617 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 CDC27P30260 824 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 NAPAP54920 295 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 KRT76Q01546 638 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 PAK2Q13177 524 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 SMAD4Q13485 552 aaKnown RBP15.56■□□□□ 0.08
IRF3-225ENST00000600022 CEP55Q53EZ4 464 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 APOA5Q6Q788 366 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 ABHD15Q6UXT9 468 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 TRMT1LQ7Z2T5 733 aaKnown RBP15.56■□□□□ 0.08
IRF3-225ENST00000600022 CCDC60Q8IWA6 550 aaPredicted RBP15.56■□□□□ 0.08
IRF3-225ENST00000600022 VN1R2Q8NFZ6 395 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 P2RX5Q93086 422 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 SDF4Q9BRK5 362 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 ANO3Q9BYT9 981 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 ERVK-5Q9HDB9 667 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 BARX2Q9UMQ3 279 aaPredicted RBP15.56■□□□□ 0.08
IRF3-225ENST00000600022 LIMCH1Q9UPQ0 1083 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 FAM50BQ9Y247 325 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 SQORQ9Y6N5 450 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 NFASCO94856 1347 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 KIAA1671Q9BY89 1806 aa15.56■□□□□ 0.08
IRF3-225ENST00000600022 TECTAO75443 2155 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 SMCO2A6NFE2 343 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 NDUFV1P49821 464 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 ERVFC1P60507 584 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 NHLH1Q02575 133 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 Q6ZUG5 572 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 TMX3Q96JJ7 454 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 PHOX2BQ99453 314 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 ADAM2Q99965 735 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 FTHL17Q9BXU8 183 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 SH2B1Q9NRF2 756 aaPredicted RBP15.55■□□□□ 0.08
IRF3-225ENST00000600022 CHMP5Q9NZZ3 219 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 CIZ1Q9ULV3 898 aaPredicted RBP15.55■□□□□ 0.08
IRF3-225ENST00000600022 ST3GAL5Q9UNP4 418 aa15.55■□□□□ 0.08
IRF3-225ENST00000600022 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 EYA4O95677 639 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 CLK2P49760 499 aaKnown RBP15.54■□□□□ 0.08
IRF3-225ENST00000600022 EVCP57679 992 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 HERC4Q5GLZ8 1057 aaPredicted RBP15.54■□□□□ 0.08
IRF3-225ENST00000600022 IER5LQ5T953 404 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 SWSAP1Q6NVH7 229 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 EFHBQ8N7U6 833 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 USP34Q70CQ2 3546 aa15.54■□□□□ 0.08
IRF3-225ENST00000600022 PLXNA4Q9HCM2 1894 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 IGLV3-22A0A075B6J6 115 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 TBKBP1A7MCY6 615 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 M0QZ92 97 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 BACH1O14867 736 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 STAG3L1P0CL83 205 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 FGFR1P11362 822 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 ADD1P35611 737 aaKnown RBP15.53■□□□□ 0.08
IRF3-225ENST00000600022 SREBF1P36956 1147 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 SARSP49591 514 aaKnown RBP15.53■□□□□ 0.08
IRF3-225ENST00000600022 MRE11P49959 708 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 ADCY7P51828 1080 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
IRF3-225ENST00000600022 CUL4AQ13619 759 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms