RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 KRT2P35908 639 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
IRF3-224ENST00000599680 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 NEK8Q86SG6 692 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 METTL13Q8N6R0 699 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 RDM1Q8NG50 284 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 GJA10Q969M2 543 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 TOP1MTQ969P6 601 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 ARID2Q68CP9 1835 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
IRF3-224ENST00000599680 EDIL3O43854 480 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 CCNT1O60563 726 aaKnown RBP16.15■□□□□ 0.18
IRF3-224ENST00000599680 PSMD10O75832 226 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 OATP04181 439 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 ATP4AP20648 1035 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 HTRA4P83105 476 aaPredicted RBP16.15■□□□□ 0.18
IRF3-224ENST00000599680 PRKCEQ02156 737 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 SKIV2LQ15477 1246 aaKnown RBP16.15■□□□□ 0.18
IRF3-224ENST00000599680 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 FTHL17Q9BXU8 183 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 KDM3AQ9Y4C1 1321 aa16.15■□□□□ 0.18
IRF3-224ENST00000599680 COL4A6Q14031 1691 aa16.14■□□□□ 0.18
IRF3-224ENST00000599680 PRUNE2Q8WUY3 3088 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 MAGEB2O15479 319 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 C22orf31O95567 290 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 TMOD1P28289 359 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 FOSBP53539 338 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 ERVK-21P61565 698 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 GRB10Q13322 594 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 SPRED2Q7Z698 418 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 NSUN7Q8NE18 718 aaKnown RBP16.14■□□□□ 0.17
IRF3-224ENST00000599680 FBXO22Q8NEZ5 403 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 GDPD5Q8WTR4 605 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 SAMD11Q96NU1 681 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 THEGQ9P2T0 379 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 PADI3Q9ULW8 664 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 AKT3Q9Y243 479 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 MTCH2Q9Y6C9 303 aa16.14■□□□□ 0.17
IRF3-224ENST00000599680 CUL9Q8IWT3 2517 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 ZBTB42B2RXF5 422 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 ENPP3O14638 875 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 SLC37A4O43826 429 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 FDPSP14324 419 aaKnown RBP16.13■□□□□ 0.17
IRF3-224ENST00000599680 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
IRF3-224ENST00000599680 PPP4R3AQ6IN85 833 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 ETNPPLQ8TBG4 499 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
IRF3-224ENST00000599680 FAM20AQ96MK3 541 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 PPP1R16BQ96T49 567 aa16.13■□□□□ 0.17
IRF3-224ENST00000599680 AGO3Q9H9G7 860 aaKnown RBP16.13■□□□□ 0.17
IRF3-224ENST00000599680 SEPT9Q9UHD8 586 aaPredicted RBP16.13■□□□□ 0.17
IRF3-224ENST00000599680 FNDC1Q4ZHG4 1894 aaPredicted RBP16.13■□□□□ 0.17
IRF3-224ENST00000599680 ZNF862O60290 1169 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 JAK2O60674 1132 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
IRF3-224ENST00000599680 VTNP04004 478 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 POU3F3P20264 500 aaPredicted RBP16.12■□□□□ 0.17
IRF3-224ENST00000599680 TBC1D8BQ0IIM8 1120 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 NR5A1Q13285 461 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 UGCGQ16739 394 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 KIZQ2M2Z5 673 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 EFCAB12Q6NXP0 572 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 FIBCD1Q8N539 461 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 SCLT1Q96NL6 688 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 C17orf80Q9BSJ5 609 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 LRFN2Q9ULH4 789 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 REV3LO60673 3130 aa16.12■□□□□ 0.17
IRF3-224ENST00000599680 A0A0C4DFX4 3053 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 DENND3A2RUS2 1198 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 DKC1O60832 514 aaKnown RBP eCLIP16.11■□□□□ 0.179e-9■■■□□ 15.7
IRF3-224ENST00000599680 MMP1P03956 469 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 STAG3L1P0CL83 205 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
IRF3-224ENST00000599680 CLCN3P51790 818 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 CRYBB1P53674 252 aaPredicted RBP16.11■□□□□ 0.17
IRF3-224ENST00000599680 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
IRF3-224ENST00000599680 MTERF2Q49AM1 385 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 XKR3Q5GH77 459 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 CCDC83Q8IWF9 413 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 LRRC71Q8N4P6 559 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 BANK1Q8NDB2 785 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 SYMPKQ92797 1274 aaKnown RBP16.11■□□□□ 0.17
IRF3-224ENST00000599680 ZSCAN31Q96LW9 406 aaPredicted RBP16.11■□□□□ 0.17
IRF3-224ENST00000599680 SUGCTQ9HAC7 445 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
IRF3-224ENST00000599680 PRDM6Q9NQX0 595 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
IRF3-224ENST00000599680 LMCD1Q9NZU5 365 aa16.11■□□□□ 0.17
IRF3-224ENST00000599680 NOC2LQ9Y3T9 749 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms