RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 NOSTRINQ8IVI9 506 aa14.44□□□□□ -0.1
SH2D3A-208ENST00000599563 TBCKQ8TEA7 893 aa14.44□□□□□ -0.1
SH2D3A-208ENST00000599563 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
SH2D3A-208ENST00000599563 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
SH2D3A-208ENST00000599563 COL4A6Q14031 1691 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 CYP3A7-CYP3A51PA0A087WV96 503 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 SMIM35A0A1B0GVV1 85 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 GAS7O60861 476 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 CHRNA1P02708 482 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 POU3F3P20264 500 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 IGFBP4P22692 258 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 CYP3A7P24462 503 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 JAK3P52333 1124 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 TAP1Q03518 808 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 FOXD4L6Q3SYB3 417 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 Q4G0T1 1027 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 SWSAP1Q6NVH7 229 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 FOXD4L3Q6VB84 417 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 RUFY4Q6ZNE9 571 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 CCDC60Q8IWA6 550 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 CKAP2LQ8IYA6 745 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 RDM1Q8NG50 284 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 DNAJB3Q8WWF6 145 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 LENG9Q96B70 501 aa14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 MAFBQ9Y5Q3 323 aaPredicted RBP14.43□□□□□ -0.1
SH2D3A-208ENST00000599563 RALGAPA2Q2PPJ7 1873 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 TDP2O95551 362 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 ATP2B1P20020 1258 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 MGAT3Q09327 533 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 FBXO47Q5MNV8 452 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 ODR4Q5SWX8 454 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 LRCH2Q5VUJ6 765 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 TSHZ1Q6ZSZ6 1077 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 MYOCDQ8IZQ8 938 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 SLC5A5Q92911 643 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 TEKT3Q9BXF9 490 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 FTHL17Q9BXU8 183 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 FAM49AQ9H0Q0 323 aaPredicted RBP14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 SAMM50Q9Y512 469 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 TRPV2Q9Y5S1 764 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 CDY2AQ9Y6F7 541 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 ARID2Q68CP9 1835 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 NLRC5Q86WI3 1866 aa14.42□□□□□ -0.1
SH2D3A-208ENST00000599563 KDM3AQ9Y4C1 1321 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 CDH23Q9H251 3354 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 MSH4O15457 936 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 MAGEB2O15479 319 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 GHRP10912 638 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 GCFC2P16383 781 aaKnown RBP14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 KLRC1P26715 233 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 HTRA4P83105 476 aaPredicted RBP14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 ADGRE1Q14246 886 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 LPIN1Q14693 890 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 TCTN1Q2MV58 587 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 ARNTL2Q8WYA1 636 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 TOP1MTQ969P6 601 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 SAMD11Q96NU1 681 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 TGS1Q96RS0 853 aaKnown RBP14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 DISC1Q9NRI5 854 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 NRBP2Q9NSY0 501 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 COL4A4P53420 1690 aaPredicted RBP14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 TTC3P53804 2025 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 IGSF9BQ9UPX0 1349 aa14.41□□□□□ -0.1
SH2D3A-208ENST00000599563 SLC37A4O43826 429 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 ERVK-21P61565 698 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 NUCB2P80303 420 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 LETM2Q2VYF4 491 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 BRAPQ7Z569 592 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 NEK8Q86SG6 692 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 MBOAT7Q96N66 472 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 UIMC1Q96RL1 719 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 YME1L1Q96TA2 773 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 LMCD1Q9NZU5 365 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 CHD7Q9P2D1 2997 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 GABBR1Q9UBS5 961 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 PCDHB6Q9Y5E3 794 aa14.4□□□□□ -0.1
SH2D3A-208ENST00000599563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 LINC01553A4QN01 128 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 TMOD1P28289 359 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 PAK2Q13177 524 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 TTC38Q5R3I4 469 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 FAM117BQ6P1L5 589 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 TRAPPC12Q8WVT3 735 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 SYMPKQ92797 1274 aaKnown RBP14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
SH2D3A-208ENST00000599563 ZSCAN16Q9H4T2 348 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms