RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 KDM3AQ9Y4C1 1321 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 GPR37L1O60883 481 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 ITGB1P05556 798 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 NEFLP07196 543 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 SCG2P13521 617 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 KCNA4P22459 653 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZP2Q05996 745 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 NFX1Q12986 1120 aaKnown RBP13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 PKN1Q16512 942 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 CTC1Q2NKJ3 1217 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 PDXDC2PQ6P474 469 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 BRF1Q92994 677 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 PHKBQ93100 1093 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 FAM122AQ96E09 287 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 FTHL17Q9BXU8 183 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 ERVK-5Q9HDB9 667 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZNF302Q9NR11 478 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 PLAGL2Q9UPG8 496 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 SQORQ9Y6N5 450 aa13.76□□□□□ -0.21
SOX2-OT-228ENST00000597828 COL1A2P08123 1366 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 IPO5O00410 1097 aaKnown RBP13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 HBP1O60381 514 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 RPLP2P05387 115 aaKnown RBP13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 FGD1P98174 961 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 KRT32Q14532 448 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 FAM160B1Q5W0V3 765 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 SWSAP1Q6NVH7 229 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 NIPA1Q7RTP0 329 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 OSMRQ99650 979 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZMYND12Q9H0C1 365 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 HCN4Q9Y3Q4 1203 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 WDFY4Q6ZS81 3184 aa13.75□□□□□ -0.21
SOX2-OT-228ENST00000597828 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 ESYT2A0FGR8 921 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 MBTPS2O43462 519 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 RPS6KA5O75582 802 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 C22orf31O95567 290 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 VTNP04004 478 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 CYP3A4P08684 503 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 SLC26A2P50443 739 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 RCAN1P53805 252 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 MIS18BP1Q6P0N0 1132 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 FAM228AQ86W67 206 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 REXO1Q8N1G1 1221 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 P2RX5Q93086 422 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 PLVAPQ9BX97 442 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 LRFN2Q9ULH4 789 aa13.74□□□□□ -0.21
SOX2-OT-228ENST00000597828 EDIL3O43854 480 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 STAG3L1P0CL83 205 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 HSPA4P34932 840 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 CLCN3P51790 818 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 NTRK3Q16288 839 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 PRR16Q569H4 304 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 FAM102BQ5T8I3 360 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 BLOC1S2Q6QNY1 142 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 CKAP2LQ8IYA6 745 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 NME8Q8N427 588 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 POF1BQ8WVV4 589 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 KCNB2Q92953 911 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 TNPO1Q92973 898 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 GJA10Q969M2 543 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 LENG9Q96B70 501 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZNF668Q96K58 619 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 ADAM2Q99965 735 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 GLT8D2Q9H1C3 349 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 GABBR1Q9UBS5 961 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 ST3GAL5Q9UNP4 418 aa13.73□□□□□ -0.21
SOX2-OT-228ENST00000597828 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 GLP2RO95838 553 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 FGFR1P11362 822 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 RPS6KB1P23443 525 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 NDUFV1P49821 464 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 SETQ01105 290 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 SMAD2Q15796 467 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 RBM23Q86U06 439 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 ADHFE1Q8IWW8 467 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 METTL13Q8N6R0 699 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 MAFBQ9Y5Q3 323 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-228ENST00000597828 MTCL1Q9Y4B5 1905 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 DENND3A2RUS2 1198 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms