RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 RUSC1Q9BVN2 902 aa23.25■■□□□ 1.31
IRF3-214ENST00000596788 TUT1Q9H6E5 874 aaKnown RBP23.25■■□□□ 1.31
IRF3-214ENST00000596788 MYMKA6NI61 221 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 GTPBP6O43824 516 aaPredicted RBP23.24■■□□□ 1.31
IRF3-214ENST00000596788 CYP11B2P19099 503 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 LRRC41Q15345 812 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 XKR9Q5GH70 373 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 OTUD6AQ7L8S5 288 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 BBXQ8WY36 941 aaPredicted RBP23.24■■□□□ 1.31
IRF3-214ENST00000596788 ERCC4Q92889 916 aaPredicted RBP23.24■■□□□ 1.31
IRF3-214ENST00000596788 CCDC43Q96MW1 224 aaKnown RBP23.24■■□□□ 1.31
IRF3-214ENST00000596788 NIFKQ9BYG3 293 aaKnown RBP23.24■■□□□ 1.31
IRF3-214ENST00000596788 RNF208Q9H0X6 261 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 BLZF1Q9H2G9 400 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 RNPEPQ9H4A4 650 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 TRPC6Q9Y210 931 aa23.24■■□□□ 1.31
IRF3-214ENST00000596788 ZEB2O60315 1214 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 KPNA6O60684 536 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 MYCNP04198 464 aaPredicted RBP23.23■■□□□ 1.31
IRF3-214ENST00000596788 PSEN2P49810 448 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 CUL4BQ13620 913 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 RNF180Q86T96 592 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 DEFB118Q96PH6 123 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 TRIM9Q9C026 710 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 CYP26B1Q9NR63 512 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 NRBP2Q9NSY0 501 aa23.23■■□□□ 1.31
IRF3-214ENST00000596788 ZBTB42B2RXF5 422 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 HAS3O00219 553 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 DPYDQ12882 1025 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 MFSD10Q14728 455 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 TARBP2Q15633 366 aaKnown RBP23.22■■□□□ 1.31
IRF3-214ENST00000596788 KCNA10Q16322 511 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 ARSHQ5FYA8 562 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 RINT1Q6NUQ1 792 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 PADI6Q6TGC4 694 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 CXCL17Q6UXB2 119 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 CEP89Q96ST8 783 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 C7orf25Q9BPX7 421 aa23.22■■□□□ 1.31
IRF3-214ENST00000596788 MTG1Q9BT17 334 aaPredicted RBP23.22■■□□□ 1.31
IRF3-214ENST00000596788 HOOK1Q9UJC3 728 aaKnown RBP23.22■■□□□ 1.31
IRF3-214ENST00000596788 MYH11P35749 1972 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 NPHP3-ACAD11A0A0J9YXS1 232 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 HBP1O60381 514 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 USO1O60763 962 aaKnown RBP23.21■■□□□ 1.31
IRF3-214ENST00000596788 ASGR1P07306 291 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 AMPD3Q01432 767 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 KIAA0753Q2KHM9 967 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
IRF3-214ENST00000596788 C1orf186Q6ZWK4 172 aa23.21■■□□□ 1.31
IRF3-214ENST00000596788 PCSK9Q8NBP7 692 aaKnown RBP23.21■■□□□ 1.31
IRF3-214ENST00000596788 BMP2KQ9NSY1 1161 aaPredicted RBP23.21■■□□□ 1.31
IRF3-214ENST00000596788 KAT6AQ92794 2004 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 CNNM4Q6P4Q7 775 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 DYMQ7RTS9 669 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 PPP1R13LQ8WUF5 828 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 TRAPPC12Q8WVT3 735 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 DDX12PQ92771 950 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 DNAJC19Q96DA6 116 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 KATNAL1Q9BW62 490 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 LRRC27Q9C0I9 530 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 MCOLN1Q9GZU1 580 aa23.2■■□□□ 1.3
IRF3-214ENST00000596788 COL1A2P08123 1366 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 MYL1P05976 194 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 INSRRP14616 1297 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 CHMP4BP1P59074 171 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 ASIC1P78348 528 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 CACNB1Q02641 598 aaPredicted RBP23.19■■□□□ 1.3
IRF3-214ENST00000596788 RAD51AP2Q09MP3 1159 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 PPFIA1Q13136 1202 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 REEP2Q9BRK0 252 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 KCND2Q9NZV8 630 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 OGDHLQ9ULD0 1010 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 PCDHA5Q9Y5H7 936 aa23.19■■□□□ 1.3
IRF3-214ENST00000596788 KRT18P05783 430 aaKnown RBP23.18■■□□□ 1.3
IRF3-214ENST00000596788 SMIM10L2AP0DMW4 78 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 SMIM10L2BP0DMW5 78 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 GUCY2CP25092 1073 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 ACLYP53396 1101 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 EMC2Q15006 297 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 ZSCAN23Q3MJ62 389 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 ZNF484Q5JVG2 852 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 ARRDC4Q8NCT1 418 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
IRF3-214ENST00000596788 DHX33Q9H6R0 707 aaKnown RBP23.18■■□□□ 1.3
IRF3-214ENST00000596788 XPNPEP1Q9NQW7 623 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 PPME1Q9Y570 386 aa23.18■■□□□ 1.3
IRF3-214ENST00000596788 KLRC4O43908 158 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 DGAT1O75907 488 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 RFC5P40937 340 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 POLGP54098 1239 aaPredicted RBP23.17■■□□□ 1.3
IRF3-214ENST00000596788 IGBP1P78318 339 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 MAPK7Q13164 816 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 GIT2Q14161 759 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 GRIK4Q16099 956 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 SPATA20Q8TB22 786 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 SMARCE1Q969G3 411 aa23.17■■□□□ 1.3
IRF3-214ENST00000596788 CRISPLD2Q9H0B8 497 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms