RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 ADD1P35611 737 aaKnown RBP18.11■□□□□ 0.49
LINC02560-201ENST00000596379 ADAM15Q13444 863 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 KRT32Q14532 448 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 SWSAP1Q6NVH7 229 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 MIS18BP1Q6P0N0 1132 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 PDXDC2PQ6P474 469 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 CCDC60Q8IWA6 550 aaPredicted RBP18.11■□□□□ 0.49
LINC02560-201ENST00000596379 ERVK-5Q9HDB9 667 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
LINC02560-201ENST00000596379 PCDHB7Q9Y5E2 793 aa18.11■□□□□ 0.49
LINC02560-201ENST00000596379 MYH9P35579 1960 aaKnown RBP18.11■□□□□ 0.49
LINC02560-201ENST00000596379 IGLV3-22A0A075B6J6 115 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 IPO5O00410 1097 aaKnown RBP18.1■□□□□ 0.49
LINC02560-201ENST00000596379 ADAMTS3O15072 1205 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 MGEA5O60502 916 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 CYP3A4P08684 503 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 ATP4AP20648 1035 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
LINC02560-201ENST00000596379 IRS1P35568 1242 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 SARSP49591 514 aaKnown RBP18.1■□□□□ 0.49
LINC02560-201ENST00000596379 FGD1P98174 961 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 PFKFB3Q16875 520 aaPredicted RBP18.1■□□□□ 0.49
LINC02560-201ENST00000596379 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 ADGRD2Q7Z7M1 963 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 POF1BQ8WVV4 589 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 CRYGNQ8WXF5 182 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 CD207Q9UJ71 328 aa18.1■□□□□ 0.49
LINC02560-201ENST00000596379 COL1A2P08123 1366 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 ZBTB42B2RXF5 422 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 PPFIA3O75145 1194 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
LINC02560-201ENST00000596379 CPA1P15085 419 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
LINC02560-201ENST00000596379 RCAN1P53805 252 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 SMAD4Q13485 552 aaKnown RBP18.09■□□□□ 0.49
LINC02560-201ENST00000596379 TMEM40Q8WWA1 233 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 PPP2R3CQ969Q6 453 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 ADAM2Q99965 735 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 ZNF577Q9BSK1 485 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 UPF3BQ9BZI7 483 aaKnown RBP18.09■□□□□ 0.49
LINC02560-201ENST00000596379 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
LINC02560-201ENST00000596379 FNDC1Q4ZHG4 1894 aaPredicted RBP18.09■□□□□ 0.49
LINC02560-201ENST00000596379 PLXNA4Q9HCM2 1894 aa18.08■□□□□ 0.49
LINC02560-201ENST00000596379 NDUFV1P49821 464 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 APOBRQ0VD83 1088 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 FAM102BQ5T8I3 360 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 Q6ZUG5 572 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 TRMT1LQ7Z2T5 733 aaKnown RBP18.08■□□□□ 0.48
LINC02560-201ENST00000596379 RBM23Q86U06 439 aaKnown RBP18.08■□□□□ 0.48
LINC02560-201ENST00000596379 CKAP2LQ8IYA6 745 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 PPP1R16BQ96T49 567 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 RGS18Q9NS28 235 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 TBC1D22BQ9NU19 505 aa18.08■□□□□ 0.48
LINC02560-201ENST00000596379 MAFBQ9Y5Q3 323 aaPredicted RBP18.08■□□□□ 0.48
LINC02560-201ENST00000596379 MUC6Q6W4X9 2439 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 CCDC196A0A1B0GTZ2 297 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 ESYT2A0FGR8 921 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 DENND3A2RUS2 1198 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 TBKBP1A7MCY6 615 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 GPR182O15218 404 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 CDC45O75419 566 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 ODR4Q5SWX8 454 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 SPOUT1Q5T280 376 aaKnown RBP18.07■□□□□ 0.48
LINC02560-201ENST00000596379 FAM43BQ6ZT52 329 aaPredicted RBP18.07■□□□□ 0.48
LINC02560-201ENST00000596379 SLC24A5Q71RS6 500 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 EFHBQ8N7U6 833 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 BBXQ8WY36 941 aaPredicted RBP18.07■□□□□ 0.48
LINC02560-201ENST00000596379 MSLNLQ96KJ4 702 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 POP1Q99575 1024 aaKnown RBP18.07■□□□□ 0.48
LINC02560-201ENST00000596379 OSMRQ99650 979 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 C6orf50Q9HD87 102 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 C1orf112Q9NSG2 853 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 CLEC1BQ9P126 229 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 PCDHGC5Q9Y5F6 944 aa18.07■□□□□ 0.48
LINC02560-201ENST00000596379 C9IYK1 514 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 C22orf31O95567 290 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 NRIP1P48552 1158 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 CRYBB1P53674 252 aaPredicted RBP18.06■□□□□ 0.48
LINC02560-201ENST00000596379 PKN1Q16512 942 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 MCTP2Q6DN12 878 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 ZNF746Q6NUN9 644 aaPredicted RBP18.06■□□□□ 0.48
LINC02560-201ENST00000596379 CENPQQ7L2Z9 268 aaPredicted RBP18.06■□□□□ 0.48
LINC02560-201ENST00000596379 REXO1Q8N1G1 1221 aaKnown RBP18.06■□□□□ 0.48
LINC02560-201ENST00000596379 METTL13Q8N6R0 699 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 CCDC12Q8WUD4 166 aaPredicted RBP18.06■□□□□ 0.48
LINC02560-201ENST00000596379 RNF216Q9NWF9 866 aaPredicted RBP18.06■□□□□ 0.48
LINC02560-201ENST00000596379 GABBR1Q9UBS5 961 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 PCDHB12Q9Y5F1 795 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 PCDHA10Q9Y5I2 948 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 WDR81Q562E7 1941 aa18.06■□□□□ 0.48
LINC02560-201ENST00000596379 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
LINC02560-201ENST00000596379 GPR32O75388 356 aa18.05■□□□□ 0.48
LINC02560-201ENST00000596379 EYA4O95677 639 aa18.05■□□□□ 0.48
LINC02560-201ENST00000596379 VTNP04004 478 aa18.05■□□□□ 0.48
LINC02560-201ENST00000596379 PSAPP07602 524 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms