RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 MRPS6P82932 125 aaKnown RBP20.46■□□□□ 0.87
ZNF558-204ENST00000596172 PDIA5Q14554 519 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 CNKSR3Q6P9H4 555 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 ANO5Q75V66 913 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 TRMT1LQ7Z2T5 733 aaKnown RBP20.46■□□□□ 0.87
ZNF558-204ENST00000596172 ZNF710Q8N1W2 664 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 LINC01465Q8N7H1 131 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 DYDC2Q96IM9 177 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 LXNQ9BS40 222 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 FAM49AQ9H0Q0 323 aaPredicted RBP20.46■□□□□ 0.87
ZNF558-204ENST00000596172 RGL1Q9NZL6 768 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 WRAP73Q9P2S5 460 aaPredicted RBP20.46■□□□□ 0.87
ZNF558-204ENST00000596172 SQORQ9Y6N5 450 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 KDM3AQ9Y4C1 1321 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 KAT6AQ92794 2004 aa20.46■□□□□ 0.87
ZNF558-204ENST00000596172 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 VPS37CA5D8V6 355 aaPredicted RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 TECP42680 631 aa20.45■□□□□ 0.86
ZNF558-204ENST00000596172 SMAD3P84022 425 aaKnown RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 TMEM266Q2M3C6 531 aa20.45■□□□□ 0.86
ZNF558-204ENST00000596172 PLEKHG4Q58EX7 1191 aa20.45■□□□□ 0.86
ZNF558-204ENST00000596172 GPR153Q6NV75 609 aa20.45■□□□□ 0.86
ZNF558-204ENST00000596172 CXXC1Q9P0U4 656 aaPredicted RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 SEPT9Q9UHD8 586 aaPredicted RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 LAMA2P24043 3122 aaKnown RBP20.45■□□□□ 0.86
ZNF558-204ENST00000596172 TANC1Q9C0D5 1861 aa20.45■□□□□ 0.86
ZNF558-204ENST00000596172 IGKV6-21A0A0C4DH24 114 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 ABHD14A-ACY1A0A1B0GW23 586 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 POTEMA6NI47 508 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 SOX1O00570 391 aaPredicted RBP20.44■□□□□ 0.86
ZNF558-204ENST00000596172 EFCAB14O75071 495 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
ZNF558-204ENST00000596172 TMOD1P28289 359 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 TBC1D8BQ0IIM8 1120 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 EFCAB12Q6NXP0 572 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 FAM43BQ6ZT52 329 aaPredicted RBP20.44■□□□□ 0.86
ZNF558-204ENST00000596172 OTUD6AQ7L8S5 288 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 TPH2Q8IWU9 490 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 EXOC8Q8IYI6 725 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 USP38Q8NB14 1042 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 POLR3CQ9BUI4 534 aaPredicted RBP20.44■□□□□ 0.86
ZNF558-204ENST00000596172 CELF4Q9BZC1 486 aaKnown RBP20.44■□□□□ 0.86
ZNF558-204ENST00000596172 FOXD4L1Q9NU39 408 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 TRPV2Q9Y5S1 764 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 STK24Q9Y6E0 443 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 CDY2AQ9Y6F7 541 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 SLC4A7Q9Y6M7 1214 aa20.44■□□□□ 0.86
ZNF558-204ENST00000596172 MYH9P35579 1960 aaKnown RBP20.44■□□□□ 0.86
ZNF558-204ENST00000596172 M0QZ92 97 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 STX6O43752 255 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 YWHABP31946 246 aaKnown RBP20.43■□□□□ 0.86
ZNF558-204ENST00000596172 ATP2C1P98194 919 aaPredicted RBP20.43■□□□□ 0.86
ZNF558-204ENST00000596172 CYP4A11Q02928 519 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 IKBKEQ14164 716 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 CTTNQ14247 550 aaKnown RBP20.43■□□□□ 0.86
ZNF558-204ENST00000596172 FBXO47Q5MNV8 452 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 METTL13Q8N6R0 699 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 IGSF22Q8N9C0 903 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 ERMNQ8TAM6 284 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 PHOSPHO2Q8TCD6 241 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 SEPT8Q92599 483 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 JPH2Q9BR39 696 aaPredicted RBP20.43■□□□□ 0.86
ZNF558-204ENST00000596172 RAB34Q9BZG1 259 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 TUFT1Q9NNX1 390 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 CYP26B1Q9NR63 512 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 MTMR6Q9Y217 621 aa20.43■□□□□ 0.86
ZNF558-204ENST00000596172 MAFO75444 373 aaPredicted RBP20.42■□□□□ 0.86
ZNF558-204ENST00000596172 BMP15O95972 392 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 HSP90AA1P07900 732 aaKnown RBP20.42■□□□□ 0.86
ZNF558-204ENST00000596172 SPATA31C1P0DKV0 1188 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 MUTP22033 750 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 RPA1P27694 616 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 LPIN1Q14693 890 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 MTERF2Q49AM1 385 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 ARL6IP4Q66PJ3 421 aaKnown RBP20.42■□□□□ 0.86
ZNF558-204ENST00000596172 DBF4BQ8NFT6 615 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 APBB2Q92870 758 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 ANKEF1Q9NU02 776 aa20.42■□□□□ 0.86
ZNF558-204ENST00000596172 TMEM150BA6NC51 233 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 RFC5P40937 340 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 CDC42EP1Q00587 391 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 RESTQ13127 1097 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 MKRN4PQ13434 485 aaPredicted RBP20.41■□□□□ 0.86
ZNF558-204ENST00000596172 TCTN1Q2MV58 587 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 DTHD1Q6ZMT9 781 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 TSHZ1Q6ZSZ6 1077 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 FERMT3Q86UX7 667 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 CATSPER3Q86XQ3 398 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 CEP170P1Q96L14 293 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 OSBPL7Q9BZF2 842 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 ZSCAN16Q9H4T2 348 aaPredicted RBP20.41■□□□□ 0.86
ZNF558-204ENST00000596172 LRWD1Q9UFC0 647 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 SCN5AQ14524 2016 aa20.41■□□□□ 0.86
ZNF558-204ENST00000596172 ZBBXA8MT70 800 aa20.4■□□□□ 0.86
ZNF558-204ENST00000596172 GPR32O75388 356 aa20.4■□□□□ 0.86
ZNF558-204ENST00000596172 DNM2P50570 870 aa20.4■□□□□ 0.86
ZNF558-204ENST00000596172 CLCN3P51790 818 aa20.4■□□□□ 0.86
ZNF558-204ENST00000596172 CRYBB1P53674 252 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms