RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 GINS2Q9Y248 185 aa15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 HCFC2Q9Y5Z7 792 aa15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 ACACBO00763 2458 aa15.82■□□□□ 0.12
SHKBP1-208ENST00000595726 M0QZ92 97 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 CYTH3O43739 400 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 KCNA2P16389 499 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 TPRNQ4KMQ1 711 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 TMC7Q7Z402 723 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 CCDC105Q8IYK2 499 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 DTWD2Q8NBA8 298 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 PCYT2Q99447 389 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 SMARCAD1Q9H4L7 1026 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 BAZ2BQ9UIF8 2168 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 NOC2LQ9Y3T9 749 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 R4GN57 208 aa15.81■□□□□ 0.12
SHKBP1-208ENST00000595726 CHD6Q8TD26 2715 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 RRN3P2A6NIE6 340 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 AOC1P19801 751 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 PDE4AP27815 886 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 KRT76Q01546 638 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 PLCB3Q01970 1234 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 RARS2Q5T160 578 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 PCNX4Q63HM2 1172 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 LRRC55Q6ZSA7 311 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 NLRX1Q86UT6 975 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 ZDHHC14Q8IZN3 488 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 CASP10Q92851 521 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 NECTIN4Q96NY8 510 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 ERVK-5Q9HDB9 667 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 LZTS1Q9Y250 596 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 PCDHA2Q9Y5H9 948 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 SPTBN2O15020 2390 aa15.8■□□□□ 0.12
SHKBP1-208ENST00000595726 PNMA6FA0A0J9YX94 578 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 DENND3A2RUS2 1198 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 C9IYK1 514 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 LMNAP02545 664 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 ITIH3Q06033 890 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 PLCB4Q15147 1175 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 SEC23AQ15436 765 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 CYB5R4Q7L1T6 521 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 MRPL43Q8N983 215 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 TDRD5Q8NAT2 981 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 GIMAP8Q8ND71 665 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 TMEM40Q8WWA1 233 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 NGRNQ9NPE2 291 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 RGS18Q9NS28 235 aa15.79■□□□□ 0.12
SHKBP1-208ENST00000595726 LOXHD1Q8IVV2 1947 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 FNDC1Q4ZHG4 1894 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 CLASP2O75122 1294 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 ITGB5P18084 799 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 LAG3P18627 525 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 MTHFRP42898 656 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 PUM1Q14671 1186 aaKnown RBP eCLIP15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 KCNT2Q6UVM3 1135 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 SLC24A5Q71RS6 500 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 SMARCC2Q8TAQ2 1214 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 ATP6V0A4Q9HBG4 840 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 SENP2Q9HC62 589 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 DBR1Q9UK59 544 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
SHKBP1-208ENST00000595726 C2orf71A6NGG8 1288 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 MEIS2O14770 477 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 RPS6KA5O75582 802 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 CA8P35219 290 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 TRAF1Q13077 416 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 GRM4Q14833 912 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 SIX5Q8N196 739 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 CYP2W1Q8TAV3 490 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 RIN2Q8WYP3 895 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 CASD1Q96PB1 797 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
SHKBP1-208ENST00000595726 LAMA4Q16363 1823 aa15.77■□□□□ 0.11
SHKBP1-208ENST00000595726 KDM3AQ9Y4C1 1321 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 OTOGLQ3ZCN5 2332 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 SMIM35A0A1B0GVV1 85 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 STK25O00506 426 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 RPLP2P05387 115 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 SDSP20132 328 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 KRT17Q04695 432 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 ATAT1Q5SQI0 421 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 XRRA1Q6P2D8 792 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 MTHFD1LQ6UB35 978 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 PLCD3Q8N3E9 789 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 ZNF558Q96NG5 402 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 HINFPQ9BQA5 517 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 KRT23Q9C075 422 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 C1orf112Q9NSG2 853 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 RNF19AQ9NV58 838 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 FBXL21Q9UKT6 434 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 CHD8Q9HCK8 2581 aa15.76■□□□□ 0.11
SHKBP1-208ENST00000595726 CXCL14O95715 111 aa15.75■□□□□ 0.11
SHKBP1-208ENST00000595726 EOMESO95936 686 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms