RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 NOC2LQ9Y3T9 749 aaKnown RBP19.3■□□□□ 0.68
CCDC9-202ENST00000595659 PCDHA10Q9Y5I2 948 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 MAFBQ9Y5Q3 323 aaPredicted RBP19.3■□□□□ 0.68
CCDC9-202ENST00000595659 H3BQ06 376 aaPredicted RBP19.29■□□□□ 0.68
CCDC9-202ENST00000595659 MSH4O15457 936 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 CHMP2AO43633 222 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 MGEA5O60502 916 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 KIZQ2M2Z5 673 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 TIGD5Q53EQ6 642 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 NPAS4Q8IUM7 802 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 TMEM40Q8WWA1 233 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 AIFM3Q96NN9 605 aa19.29■□□□□ 0.68
CCDC9-202ENST00000595659 NSUN3Q9H649 340 aaKnown RBP19.29■□□□□ 0.68
CCDC9-202ENST00000595659 MRPL42Q9Y6G3 142 aaKnown RBP19.29■□□□□ 0.68
CCDC9-202ENST00000595659 KDM3AQ9Y4C1 1321 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 TCF20Q9UGU0 1960 aaKnown RBP19.28■□□□□ 0.68
CCDC9-202ENST00000595659 CPLX1O14810 134 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 RPS6KA5O75582 802 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 C22orf31O95567 290 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 VTNP04004 478 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 RB1P06400 928 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 SMAP1Q8IYB5 467 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-202ENST00000595659 TRIM22Q8IYM9 498 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 CRIPAKQ8N1N5 446 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 TBCKQ8TEA7 893 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 BBXQ8WY36 941 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-202ENST00000595659 CLP1Q92989 425 aaKnown RBP19.28■□□□□ 0.68
CCDC9-202ENST00000595659 OSMRQ99650 979 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 C11orf84Q9BUA3 381 aaPredicted RBP19.28■□□□□ 0.68
CCDC9-202ENST00000595659 EPHX3Q9H6B9 360 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 ERVK-5Q9HDB9 667 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 ALG13Q9NP73 1137 aaKnown RBP19.28■□□□□ 0.68
CCDC9-202ENST00000595659 CD320Q9NPF0 282 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 SH3GLB2Q9NR46 395 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 LRFN2Q9ULH4 789 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 COL1A2P08123 1366 aa19.28■□□□□ 0.68
CCDC9-202ENST00000595659 C5orf67F2Z3F1 127 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 IL9P15248 144 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 COL9A1P20849 921 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 CLCN3P51790 818 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 KHSRPQ92945 711 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCDC9-202ENST00000595659 ZNF668Q96K58 619 aaPredicted RBP19.27■□□□□ 0.68
CCDC9-202ENST00000595659 DISC1Q9NRI5 854 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 PDRG1Q9NUG6 133 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 PCDHA4Q9UN74 947 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 ST3GAL5Q9UNP4 418 aa19.27■□□□□ 0.68
CCDC9-202ENST00000595659 DENND3A2RUS2 1198 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 WDR64B1ANS9 1081 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 ZNF862O60290 1169 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 NEFLP07196 543 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 STAG3L1P0CL83 205 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 USP11P51784 963 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 UGCGQ16739 394 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 PTCRAQ6ISU1 281 aaPredicted RBP19.26■□□□□ 0.67
CCDC9-202ENST00000595659 CMTR2Q8IYT2 770 aaKnown RBP19.26■□□□□ 0.67
CCDC9-202ENST00000595659 LRRC71Q8N4P6 559 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 ZNF274Q96GC6 653 aaPredicted RBP19.26■□□□□ 0.67
CCDC9-202ENST00000595659 ADAM2Q99965 735 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 UNC45AQ9H3U1 944 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 IGFLR1Q9H665 355 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 CLDND1Q9NY35 253 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 RWDD3Q9Y3V2 267 aa19.26■□□□□ 0.67
CCDC9-202ENST00000595659 SIP14410 1827 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 GAS7O60861 476 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 GPR32O75388 356 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 DEXIO95424 95 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 TDP2O95551 362 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 GTF2F1P35269 517 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC9-202ENST00000595659 LRCH2Q5VUJ6 765 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 FAM228AQ86W67 206 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 SLC5A5Q92911 643 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 PABPC5Q96DU9 382 aaKnown RBP19.25■□□□□ 0.67
CCDC9-202ENST00000595659 TM6SF1Q9BZW5 370 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 KCNJ14Q9UNX9 436 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 PLAGL2Q9UPG8 496 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 AKT3Q9Y243 479 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 PCDHB7Q9Y5E2 793 aa19.25■□□□□ 0.67
CCDC9-202ENST00000595659 COL4A6Q14031 1691 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 EPB41L2O43491 1005 aaKnown RBP19.24■□□□□ 0.67
CCDC9-202ENST00000595659 OATP04181 439 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 SARSP49591 514 aaKnown RBP19.24■□□□□ 0.67
CCDC9-202ENST00000595659 CRYBB1P53674 252 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-202ENST00000595659 NLRP11P59045 1033 aaKnown RBP19.24■□□□□ 0.67
CCDC9-202ENST00000595659 PRKCEQ02156 737 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 HYAL1Q12794 435 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 CLUL1Q15846 466 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 FAM102BQ5T8I3 360 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 EFCAB12Q6NXP0 572 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 NEK9Q8TD19 979 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 RIT2Q99578 217 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 TEKT3Q9BXF9 490 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 LMAN2LQ9H0V9 348 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 NRBP2Q9NSY0 501 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 CEP131Q9UPN4 1083 aa19.24■□□□□ 0.67
CCDC9-202ENST00000595659 GRXCR2A6NFK2 248 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 TBKBP1A7MCY6 615 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 GPR182O15218 404 aa19.23■□□□□ 0.67
CCDC9-202ENST00000595659 DNAJB1P25685 340 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms