RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 PSMD1Q99460 953 aa17.93■□□□□ 0.46
SIN3B-206ENST00000595541 ADAM7Q9H2U9 754 aa17.93■□□□□ 0.46
SIN3B-206ENST00000595541 SUCLA2Q9P2R7 463 aaPredicted RBP17.93■□□□□ 0.46
SIN3B-206ENST00000595541 ARMCX3Q9UH62 379 aaPredicted RBP17.93■□□□□ 0.46
SIN3B-206ENST00000595541 CCDC188H7C350 402 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 MEIS1O00470 390 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
SIN3B-206ENST00000595541 H2AFZP0C0S5 128 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 PRKCIP41743 596 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 CDR1P51861 262 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 GALCP54803 685 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 SLC12A3P55017 1021 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 RHBDL3P58872 404 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 ERMARDQ5T6L9 678 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 H2AFVQ71UI9 128 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 HVCN1Q96D96 273 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 XPO6Q96QU8 1125 aaKnown RBP17.92■□□□□ 0.46
SIN3B-206ENST00000595541 MTMR4Q9NYA4 1195 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.92■□□□□ 0.46
SIN3B-206ENST00000595541 FRMD3A2A2Y4 597 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L15C9J2P7 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L13C9JLJ4 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L11C9JVI0 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L18D6R9N7 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L22D6RA61 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L17D6RBQ6 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L19D6RCP7 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L20D6RJB6 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
SIN3B-206ENST00000595541 POLD1P28340 1107 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 JAM2P57087 298 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L24Q0WX57 530 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 NEDD9Q14511 834 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 EDRF1Q3B7T1 1238 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L6PQ6QN14 398 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 ZNF317Q96PQ6 595 aaPredicted RBP17.92■□□□□ 0.46
SIN3B-206ENST00000595541 SLITRK6Q9H5Y7 841 aa17.92■□□□□ 0.46
SIN3B-206ENST00000595541 PPFIA2O75334 1257 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 GFPT2O94808 682 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 XRCC4Q13426 336 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 MTMR3Q13615 1198 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 GKAP1Q5VSY0 366 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 AADACL2Q6P093 401 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 AMIGO3Q86WK7 504 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 C21orf2O43822 256 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 CTNND1O60716 968 aaKnown RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 AKR1B1P15121 316 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 SCP2P22307 547 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 ZNF211Q13398 564 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 TCERG1LQ5VWI1 586 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 SFR1Q86XK3 245 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 RNF25Q96BH1 459 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 ZDHHC18Q9NUE0 388 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 ODF2LQ9ULJ1 636 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 SUFUQ9UMX1 484 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 DDX3YO15523 660 aaKnown RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 PPIP5K2O43314 1243 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 FLOT1O75955 427 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 CHN1P15882 459 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 ELF1P32519 619 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 GSTO1P78417 241 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 IFI35P80217 286 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 GIT2Q14161 759 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 PTF1AQ7RTS3 328 aa17.91■□□□□ 0.46
SIN3B-206ENST00000595541 N4BP2L2Q92802 583 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 DHX36Q9H2U1 1008 aaKnown RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 RTCBQ9Y3I0 505 aaKnown RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 BZW2Q9Y6E2 419 aaKnown RBP17.91■□□□□ 0.46
SIN3B-206ENST00000595541 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 ARFGEF1Q9Y6D6 1849 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 GPR75-ASB3A0A0A6YYF3 556 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 USP17L10C9JJH3 530 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 CLIC2O15247 247 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
SIN3B-206ENST00000595541 KRT18P05783 430 aaKnown RBP17.9■□□□□ 0.46
SIN3B-206ENST00000595541 PSEN1P49768 467 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 IFFO1Q0D2I5 559 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 IFI16Q16666 785 aaKnown RBP17.9■□□□□ 0.46
SIN3B-206ENST00000595541 FRMD5Q7Z6J6 570 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 GLYCTKQ8IVS8 523 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 GIMAP7Q8NHV1 300 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 CCDC26Q8TAB7 109 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 SLC35C1Q96A29 364 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 CHMP6Q96FZ7 201 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 SETDB2Q96T68 719 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 FMO2Q99518 471 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 NT5C3AQ9H0P0 336 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 TRAF3IP3Q9Y228 551 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 UTP11Q9Y3A2 253 aaKnown RBP17.9■□□□□ 0.46
SIN3B-206ENST00000595541 SMIM23A6NLE4 172 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 MMP14P50281 582 aa17.9■□□□□ 0.46
SIN3B-206ENST00000595541 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.46
SIN3B-206ENST00000595541 PRPF4BQ13523 1007 aaKnown RBP17.9■□□□□ 0.46
SIN3B-206ENST00000595541 KIRREL3Q8IZU9 778 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms