RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MCM2P49736 904 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 TMEM62Q0P6H9 643 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 SAFBQ15424 915 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 TARBP2Q15633 366 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 FBXO47Q5MNV8 452 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 LINC01465Q8N7H1 131 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 BANK1Q8NDB2 785 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 TIFAQ96CG3 184 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 FAM167AQ96KS9 214 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 CEP89Q96ST8 783 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 SLC9A7Q96T83 725 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 WRAP73Q9P2S5 460 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-206ENST00000595523 RALGAPA2Q2PPJ7 1873 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 ARHGEF15O94989 841 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 GJB2P29033 226 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 IKBKEQ14164 716 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 RAB30Q15771 203 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 CALCRLQ16602 461 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 RSPH3Q86UC2 560 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 NOSTRINQ8IVI9 506 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 HERC6Q8IVU3 1022 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 PHOSPHO2Q8TCD6 241 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 SEPT8Q92599 483 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 SH2D3AQ9BRG2 576 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 IFIH1Q9BYX4 1025 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 TRPV2Q9Y5S1 764 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 ATG2AQ2TAZ0 1938 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 MYH15Q9Y2K3 1946 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 FNDC1Q4ZHG4 1894 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 KDM3AQ9Y4C1 1321 aa12.36□□□□□ -0.43
SHKBP1-206ENST00000595523 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 NEMFO60524 1076 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 MCM7P33993 719 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 KCNJ6P48051 423 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 CLCN3P51790 818 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 PSMC5P62195 406 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 CUL4AQ13619 759 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 NBR1Q14596 966 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 GRIN2CQ14957 1233 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 XKR3Q5GH77 459 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 IER5Q5VY09 327 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 ANO5Q75V66 913 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 SLFN12Q8IYM2 578 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 TMEM40Q8WWA1 233 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 CELF4Q9BZC1 486 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 ZNF576Q9H609 170 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 MSRAQ9UJ68 235 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-206ENST00000595523 LCHNA4D1U4 455 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 EFCAB14O75071 495 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 BAG4O95429 457 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 VTNP04004 478 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 CA3P07451 260 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 CD52P31358 61 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 QARSP47897 775 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 TOB1P50616 345 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 DRP2Q13474 957 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 EPHA7Q15375 998 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 ZNF174Q15697 407 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 MTERF2Q49AM1 385 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 EFCAB12Q6NXP0 572 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 TSHZ1Q6ZSZ6 1077 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 SPRED2Q7Z698 418 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 NME8Q8N427 588 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 LRRC71Q8N4P6 559 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 LINC01599Q8WXQ3 324 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 APBB2Q92870 758 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 CDX2Q99626 313 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 LXNQ9BS40 222 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 SEPT9Q9UHD8 586 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 BRWD1Q9NSI6 2320 aa12.34□□□□□ -0.43
SHKBP1-206ENST00000595523 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 POTEMA6NI47 508 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 ZBTB39O15060 712 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 MAGEB2O15479 319 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 MARCH6O60337 910 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 GPR32O75388 356 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 GJB5O95377 273 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 TXKP42681 527 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms