RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 FAM173BQ6P4H8 233 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 PSRC1Q6PGN9 363 aaPredicted RBP17.26■□□□□ 0.35
USE1-206ENST00000595101 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 HERVK_113Q902F9 699 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 HSD17B14Q9BPX1 270 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 CDHR5Q9HBB8 845 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.26■□□□□ 0.35
USE1-206ENST00000595101 NRBP2Q9NSY0 501 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 SEPT9Q9UHD8 586 aaPredicted RBP17.26■□□□□ 0.35
USE1-206ENST00000595101 CXCL10P02778 98 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 CLCN3P51790 818 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 TARBP2Q15633 366 aaKnown RBP17.25■□□□□ 0.35
USE1-206ENST00000595101 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 XKR3Q5GH77 459 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 RPAINQ86UA6 219 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 TPH2Q8IWU9 490 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 METTL13Q8N6R0 699 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
USE1-206ENST00000595101 CDY2AQ9Y6F7 541 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 SMIM35A0A1B0GVV1 85 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 RFC2P35250 354 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 DRP2Q13474 957 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 FAM26DQ5JW98 314 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
USE1-206ENST00000595101 DBF4BQ8NFT6 615 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 ZNF668Q96K58 619 aaPredicted RBP17.25■□□□□ 0.35
USE1-206ENST00000595101 FAM167AQ96KS9 214 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 NIFKQ9BYG3 293 aaKnown RBP17.25■□□□□ 0.35
USE1-206ENST00000595101 MTMR6Q9Y217 621 aa17.25■□□□□ 0.35
USE1-206ENST00000595101 COL1A2P08123 1366 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 ZBBXA8MT70 800 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 VTNP04004 478 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 SPATA31C1P0DKV0 1188 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 GHRP10912 638 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
USE1-206ENST00000595101 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
USE1-206ENST00000595101 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
USE1-206ENST00000595101 MED24O75448 989 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 PDCP20941 246 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 CDC25AP30304 524 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 MRPS6P82932 125 aaKnown RBP17.23■□□□□ 0.35
USE1-206ENST00000595101 RESTQ13127 1097 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 ORC2Q13416 577 aaPredicted RBP17.23■□□□□ 0.35
USE1-206ENST00000595101 EFCAB12Q6NXP0 572 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 LINC01465Q8N7H1 131 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 PP2D1A8MPX8 630 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 STX6O43752 255 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 CAND2O75155 1236 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 PFKMP08237 780 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
USE1-206ENST00000595101 PBX2P40425 430 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 PKP1Q13835 747 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 LPIN1Q14693 890 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 ECM1Q16610 540 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
USE1-206ENST00000595101 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 C4orf19Q8IY42 314 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 PIGOQ8TEQ8 1089 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 TMEM40Q8WWA1 233 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
USE1-206ENST00000595101 AGO3Q9H9G7 860 aaKnown RBP17.23■□□□□ 0.35
USE1-206ENST00000595101 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
USE1-206ENST00000595101 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 KAT6AQ92794 2004 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 TBC1D8BQ0IIM8 1120 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 KIZQ2M2Z5 673 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 FBXO47Q5MNV8 452 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 RSPH3Q86UC2 560 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 ZSWIM4Q9H7M6 989 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 CYP26B1Q9NR63 512 aa17.22■□□□□ 0.35
USE1-206ENST00000595101 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
USE1-206ENST00000595101 RABGGTBP53611 331 aa17.21■□□□□ 0.35
USE1-206ENST00000595101 DEFB103AP81534 67 aa17.21■□□□□ 0.35
USE1-206ENST00000595101 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
USE1-206ENST00000595101 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
USE1-206ENST00000595101 CNKSR3Q6P9H4 555 aa17.21■□□□□ 0.35
USE1-206ENST00000595101 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
USE1-206ENST00000595101 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
USE1-206ENST00000595101 MYH9P35579 1960 aaKnown RBP17.21■□□□□ 0.35
USE1-206ENST00000595101 CHD9Q3L8U1 2897 aa17.21■□□□□ 0.34
USE1-206ENST00000595101 MAGEB2O15479 319 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 GPR32O75388 356 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 PARNO95453 639 aaKnown RBP17.2■□□□□ 0.34
USE1-206ENST00000595101 CD52P31358 61 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
USE1-206ENST00000595101 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
USE1-206ENST00000595101 Q7L0L9 218 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 AKT3Q9Y243 479 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 TRPV2Q9Y5S1 764 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 SLC4A7Q9Y6M7 1214 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 IGKV6-21A0A0C4DH24 114 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 MYOGP15173 224 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms