RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 LCNL1Q6ZST4 164 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 EFHBQ8N7U6 833 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 CALML6Q8TD86 181 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 E2F7Q96AV8 911 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 LAMC3Q9Y6N6 1575 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 H0Y858 1186 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 GOLGA6L22H0YM25 854 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 FKBP9O95302 570 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 IL18BPO95998 194 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ZNF28P17035 718 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ADCYAP1R1P41586 468 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ECE1P42892 770 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 DHCR24Q15392 516 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ZNF662Q6ZS27 426 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 FKBP9P1Q75LS8 142 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 NME9Q86XW9 330 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ZCCHC14Q8WYQ9 949 aaKnown RBP6.81□□□□□ -1.32
SMAD4-216ENST00000593223 TTC1Q99614 292 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 TMEM168Q9H0V1 697 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ZCCHC4Q9H5U6 513 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 KCND1Q9NSA2 647 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 SPTLC3Q9NUV7 552 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 HECW2Q9P2P5 1572 aa6.81□□□□□ -1.32
SMAD4-216ENST00000593223 ADAMTS20P59510 1910 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 UBA6A0AVT1 1052 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-216ENST00000593223 TRIM13O60858 407 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 KNG1P01042 644 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 CHGBP05060 677 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 CPEP16870 476 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 LSSP48449 732 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 GJA9P57773 515 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 CREB3L3Q68CJ9 461 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 LRSAM1Q6UWE0 723 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 KRT26Q7Z3Y9 468 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 ZNF761Q86XN6 746 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-216ENST00000593223 ZZZ3Q8IYH5 903 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 TXNDC5Q8NBS9 432 aaKnown RBP6.8□□□□□ -1.32
SMAD4-216ENST00000593223 SCYL1Q96KG9 808 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
SMAD4-216ENST00000593223 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 BTBD2Q9BX70 525 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 AMNQ9BXJ7 453 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 IFT22Q9H7X7 185 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
SMAD4-216ENST00000593223 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
SMAD4-216ENST00000593223 RAB11FIP3O75154 756 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 MPIG6BO95866 241 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 NFKB2Q00653 900 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 SLC6A3Q01959 620 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 ROM1Q03395 351 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 ADCY1Q08828 1119 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 ATP13A4Q4VNC1 1196 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 TTC38Q5R3I4 469 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 FAM26FQ5R3K3 315 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 NT5DC1Q5TFE4 455 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 STRA8Q7Z7C7 330 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 FAM124AQ86V42 546 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 C7orf31Q8N865 590 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 MARCH10Q8NA82 808 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-216ENST00000593223 SYT8Q8NBV8 401 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 OR10A5Q9H207 317 aa6.79□□□□□ -1.32
SMAD4-216ENST00000593223 BARX1Q9HBU1 254 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-216ENST00000593223 APOL3O95236 402 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 VIL1P09327 827 aaKnown RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 CD40P25942 277 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 CANXP27824 592 aaKnown RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 ADCY8P40145 1251 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 IL13RA1P78552 427 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 ALDH6A1Q02252 535 aaKnown RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 EPHA7Q15375 998 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 PRAMEF9Q5VWM5 478 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 TIGD7Q6NT04 549 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 OTOP2Q7RTS6 562 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 RTN4RL1Q86UN2 441 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 NUDT10Q8NFP7 164 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 FOXRED1Q96CU9 486 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 NUDT11Q96G61 164 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 LCORQ96JN0 433 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 C16orf92Q96LL3 132 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 YTHDC1Q96MU7 727 aaKnown RBP6.78□□□□□ -1.32
SMAD4-216ENST00000593223 FOXB1Q99853 325 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 EMC7Q9NPA0 242 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 ZDHHC9Q9Y397 364 aa6.78□□□□□ -1.32
SMAD4-216ENST00000593223 NEMP1O14524 444 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 ZEB2O60315 1214 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 COL6A1P12109 1028 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 BPIP17213 487 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 APEX1P27695 318 aaKnown RBP6.77□□□□□ -1.33
SMAD4-216ENST00000593223 LSP1P33241 339 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 DDB1Q16531 1140 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 SLFN12LQ6IEE8 588 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 ESRP1Q6NXG1 681 aaKnown RBP6.77□□□□□ -1.33
SMAD4-216ENST00000593223 CXXC5Q7LFL8 322 aaKnown RBP6.77□□□□□ -1.33
SMAD4-216ENST00000593223 PHYKPLQ8IUZ5 450 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms