RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PARD6BQ9BYG5 372 aa21.64■■□□□ 1.05
CLIP3-206ENST00000593074 METTL14Q9HCE5 456 aaKnown RBP21.64■■□□□ 1.05
CLIP3-206ENST00000593074 POLD4Q9HCU8 107 aa21.64■■□□□ 1.05
CLIP3-206ENST00000593074 DHX15O43143 795 aaKnown RBP21.64■■□□□ 1.05
CLIP3-206ENST00000593074 AFPP02771 609 aaKnown RBP21.64■■□□□ 1.05
CLIP3-206ENST00000593074 GUCY2CP25092 1073 aa21.64■■□□□ 1.05
CLIP3-206ENST00000593074 TKFCQ3LXA3 575 aa21.64■■□□□ 1.05
CLIP3-206ENST00000593074 TRERF1Q96PN7 1200 aa21.64■■□□□ 1.05
CLIP3-206ENST00000593074 FHOD1Q9Y613 1164 aa21.64■■□□□ 1.05
CLIP3-206ENST00000593074 CTAGE15A4D2H0 777 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 ENC1O14682 589 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 SERPING1P05155 500 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 CTAGE8P0CG41 777 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 EPB41P11171 864 aaKnown RBP21.63■■□□□ 1.05
CLIP3-206ENST00000593074 XRCC5P13010 732 aaKnown RBP21.63■■□□□ 1.05
CLIP3-206ENST00000593074 MRPS9P82933 396 aaKnown RBP21.63■■□□□ 1.05
CLIP3-206ENST00000593074 SLC9C1Q4G0N8 1177 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 CTAGE6Q86UF2 777 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 CTAGE4Q8IX94 777 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 ATG4CQ96DT6 458 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 C12orf42Q96LP6 360 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 AGO4Q9HCK5 861 aaKnown RBP21.63■■□□□ 1.05
CLIP3-206ENST00000593074 PLCB1Q9NQ66 1216 aa21.63■■□□□ 1.05
CLIP3-206ENST00000593074 MACROD2A1Z1Q3 448 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 PJA2O43164 708 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 NMT1P30419 496 aaKnown RBP21.62■■□□□ 1.05
CLIP3-206ENST00000593074 HMGCS2P54868 508 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 BMS1Q14692 1282 aaKnown RBP21.62■■□□□ 1.05
CLIP3-206ENST00000593074 DPY19L2P1Q6NXN4 242 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 MSANTD4Q8NCY6 345 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 BANK1Q8NDB2 785 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 TRIM58Q8NG06 486 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 TAAR1Q96RJ0 339 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 ANKZF1Q9H8Y5 726 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 JADE2Q9NQC1 790 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 HDAC6Q9UBN7 1215 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 SAR1BQ9Y6B6 198 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 POTEB2H3BUK9 544 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 RPS6P62753 249 aaKnown RBP21.62■■□□□ 1.05
CLIP3-206ENST00000593074 APBA1Q02410 837 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 ZNF720Q7Z2F6 126 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 MIER3Q7Z3K6 550 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 KRT222Q8N1A0 295 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 AIPL1Q9NZN9 384 aa21.62■■□□□ 1.05
CLIP3-206ENST00000593074 CASP4P49662 377 aa21.61■■□□□ 1.05
CLIP3-206ENST00000593074 ITGB3BPQ13352 177 aaPredicted RBP21.61■■□□□ 1.05
CLIP3-206ENST00000593074 TDRD12Q587J7 1177 aaKnown RBP21.61■■□□□ 1.05
CLIP3-206ENST00000593074 CC2D1AQ6P1N0 951 aaPredicted RBP21.61■■□□□ 1.05
CLIP3-206ENST00000593074 RNF207Q6ZRF8 634 aa21.61■■□□□ 1.05
CLIP3-206ENST00000593074 STXBP4Q6ZWJ1 553 aa21.61■■□□□ 1.05
CLIP3-206ENST00000593074 TXLNBQ8N3L3 684 aa21.61■■□□□ 1.05
CLIP3-206ENST00000593074 SLC35C1Q96A29 364 aa21.61■■□□□ 1.05
CLIP3-206ENST00000593074 BORCS6Q96GS4 357 aa21.61■■□□□ 1.05
CLIP3-206ENST00000593074 ARHGEF35A5YM69 484 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 DDX39AO00148 427 aaKnown RBP21.6■■□□□ 1.05
CLIP3-206ENST00000593074 P4HBP07237 508 aaKnown RBP21.6■■□□□ 1.05
CLIP3-206ENST00000593074 PNMA6AP0CW24 399 aaPredicted RBP21.6■■□□□ 1.05
CLIP3-206ENST00000593074 ZC2HC1CQ53FD0 456 aaPredicted RBP21.6■■□□□ 1.05
CLIP3-206ENST00000593074 FAM178BQ8IXR5 827 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 CCDC151A5D8V7 595 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 CLIC2O15247 247 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 DSG3P32926 999 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 GFPT1Q06210 699 aaPredicted RBP21.6■■□□□ 1.05
CLIP3-206ENST00000593074 MAPK7Q13164 816 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 MTMR1Q13613 665 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 COG2Q14746 738 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 PGM5Q15124 567 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 NOL9Q5SY16 702 aaKnown RBP21.6■■□□□ 1.05
CLIP3-206ENST00000593074 TMOD4Q9NZQ9 345 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 RAB21Q9UL25 225 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 CAPN6Q9Y6Q1 641 aa21.6■■□□□ 1.05
CLIP3-206ENST00000593074 GTPBP10A4D1E9 387 aaKnown RBP21.59■■□□□ 1.05
CLIP3-206ENST00000593074 ATP8B1O43520 1251 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 EIF2AK2P19525 551 aaKnown RBP21.59■■□□□ 1.05
CLIP3-206ENST00000593074 MAGEA1P43355 309 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 EXOC3L4Q17RC7 722 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 DCAF17Q5H9S7 520 aaPredicted RBP21.59■■□□□ 1.05
CLIP3-206ENST00000593074 NSMFQ6X4W1 530 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 GPIHBP1Q8IV16 184 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 DAW1Q8N136 415 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 WNK4Q96J92 1243 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 MKNK1Q9BUB5 465 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 STRA6Q9BX79 667 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 RLFQ13129 1914 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 TACC1O75410 805 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 PPP1R37O75864 691 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
CLIP3-206ENST00000593074 PON1P27169 355 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 OAZ1P54368 228 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 RAPGEF1Q13905 1077 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 BRD3Q15059 726 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 ODR4Q5SWX8 454 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 RMDN3Q96TC7 470 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 FHDC1Q9C0D6 1143 aaPredicted RBP21.59■■□□□ 1.05
CLIP3-206ENST00000593074 RNF146Q9NTX7 359 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 TBC1D22BQ9NU19 505 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 PKD2L1Q9P0L9 805 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 DBR1Q9UK59 544 aaKnown RBP21.59■■□□□ 1.05
CLIP3-206ENST00000593074 FBXL5Q9UKA1 691 aa21.59■■□□□ 1.05
CLIP3-206ENST00000593074 ADAMTS5Q9UNA0 930 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms