RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 GABBR1Q9UBS5 961 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
CIRBP-241ENST00000593048 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-241ENST00000593048 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 RB1P06400 928 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 BMPR1AP36894 532 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 USP11P51784 963 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 TMEM266Q2M3C6 531 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 ODR4Q5SWX8 454 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 EP400NLQ6ZTU2 488 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 KIAA0319LQ8IZA0 1049 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 C11orf84Q9BUA3 381 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-241ENST00000593048 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 TM6SF1Q9BZW5 370 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 CEP131Q9UPN4 1083 aa18.27■□□□□ 0.52
CIRBP-241ENST00000593048 WDR64B1ANS9 1081 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 GAS7O60861 476 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 DGKIO75912 1065 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 DEXIO95424 95 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 ATP4AP20648 1035 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 KCNA5P22460 613 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 RTN4RL1Q86UN2 441 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-241ENST00000593048 NPAS4Q8IUM7 802 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 LINC01599Q8WXQ3 324 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 ZNF689Q96CS4 500 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-241ENST00000593048 FAM167AQ96KS9 214 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 PPP1R16BQ96T49 567 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 NSUN3Q9H649 340 aaKnown RBP18.26■□□□□ 0.51
CIRBP-241ENST00000593048 PCDHA4Q9UN74 947 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 BRWD1Q9NSI6 2320 aa18.26■□□□□ 0.51
CIRBP-241ENST00000593048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-241ENST00000593048 DENND3A2RUS2 1198 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 C5orf67F2Z3F1 127 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 GPR182O15218 404 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 MSH4O15457 936 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 TBCKQ8TEA7 893 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 CLP1Q92989 425 aaKnown RBP18.25■□□□□ 0.51
CIRBP-241ENST00000593048 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 NRBP2Q9NSY0 501 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 NOC2LQ9Y3T9 749 aaKnown RBP18.25■□□□□ 0.51
CIRBP-241ENST00000593048 COL4A6Q14031 1691 aa18.25■□□□□ 0.51
CIRBP-241ENST00000593048 ZBTB42B2RXF5 422 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 MAGEB2O15479 319 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 CHMP2AO43633 222 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 C22orf31O95567 290 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 TMOD1P28289 359 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 KIZQ2M2Z5 673 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 LEXMQ3ZCV2 418 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
CIRBP-241ENST00000593048 TCEAL5Q5H9L2 206 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 LRCH2Q5VUJ6 765 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
CIRBP-241ENST00000593048 BLIDQ8IZY5 108 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 LENG9Q96B70 501 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 RIT2Q99578 217 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 TEKT3Q9BXF9 490 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 LMAN2LQ9H0V9 348 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 CDHR5Q9HBB8 845 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 RC3H2Q9HBD1 1191 aaKnown RBP18.24■□□□□ 0.51
CIRBP-241ENST00000593048 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-241ENST00000593048 ST3GAL5Q9UNP4 418 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 PCDHB7Q9Y5E2 793 aa18.24■□□□□ 0.51
CIRBP-241ENST00000593048 CSPG5O95196 566 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 VTNP04004 478 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 SFNP31947 248 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 PLA2G5P39877 138 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 SARSP49591 514 aaKnown RBP18.23■□□□□ 0.51
CIRBP-241ENST00000593048 CRYBB1P53674 252 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-241ENST00000593048 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-241ENST00000593048 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 OSMRQ99650 979 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 ADAM2Q99965 735 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 TMX1Q9H3N1 280 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 ERVK-5Q9HDB9 667 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 AKT3Q9Y243 479 aa18.23■□□□□ 0.51
CIRBP-241ENST00000593048 GRM6O15303 877 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 CDKL5O76039 1030 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 OATP04181 439 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 CLCN3P51790 818 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 JAK3P52333 1124 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 GALNT17Q6IS24 598 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 EFCAB12Q6NXP0 572 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 SLC5A5Q92911 643 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 SLKQ9H2G2 1235 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-241ENST00000593048 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
CIRBP-241ENST00000593048 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
CIRBP-241ENST00000593048 NCK2O43639 380 aa18.21■□□□□ 0.51
CIRBP-241ENST00000593048 EDIL3O43854 480 aa18.21■□□□□ 0.51
CIRBP-241ENST00000593048 LINC00271P0C7V0 271 aa18.21■□□□□ 0.51
CIRBP-241ENST00000593048 XBP1P17861 261 aa18.21■□□□□ 0.51
CIRBP-241ENST00000593048 PRKCEQ02156 737 aa18.21■□□□□ 0.51
CIRBP-241ENST00000593048 NONOQ15233 471 aaKnown RBP eCLIP18.21■□□□□ 0.51
CIRBP-241ENST00000593048 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
CIRBP-241ENST00000593048 Q4G0T1 1027 aa18.21■□□□□ 0.51
CIRBP-241ENST00000593048 NAALADL2Q58DX5 795 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms