RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 LPIN1Q14693 890 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 EPHA7Q15375 998 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 XKR3Q5GH77 459 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 KIAA0319LQ8IZA0 1049 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 BANK1Q8NDB2 785 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 APBB2Q92870 758 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 MTMR9Q96QG7 549 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 YBX2Q9Y2T7 364 aaKnown RBP16.32■□□□□ 0.2
DDX39A-217ENST00000592391 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-217ENST00000592391 TRPV2Q9Y5S1 764 aa16.32■□□□□ 0.2
DDX39A-217ENST00000592391 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 STBD1O95210 358 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 P4HBP07237 508 aaKnown RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 GJB2P29033 226 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 MCM7P33993 719 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 QARSP47897 775 aaKnown RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 ORC2Q13416 577 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 TARBP2Q15633 366 aaKnown RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 NCAPH2Q6IBW4 605 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 METTL13Q8N6R0 699 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 GUCD1Q96NT3 240 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 NIFKQ9BYG3 293 aaKnown RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 NKX2-4Q9H2Z4 354 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 ZNF576Q9H609 170 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 SEPT9Q9UHD8 586 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-217ENST00000592391 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 SQORQ9Y6N5 450 aa16.31■□□□□ 0.2
DDX39A-217ENST00000592391 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
DDX39A-217ENST00000592391 MYOGP15173 224 aa16.3■□□□□ 0.2
DDX39A-217ENST00000592391 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
DDX39A-217ENST00000592391 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX39A-217ENST00000592391 LINC01465Q8N7H1 131 aa16.3■□□□□ 0.2
DDX39A-217ENST00000592391 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
DDX39A-217ENST00000592391 TTC12Q9H892 705 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-217ENST00000592391 SLC28A3Q9HAS3 691 aa16.3■□□□□ 0.2
DDX39A-217ENST00000592391 NOL7Q9UMY1 257 aaKnown RBP16.3■□□□□ 0.2
DDX39A-217ENST00000592391 SIP14410 1827 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 TMEM150BA6NC51 233 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 AMHP03971 560 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 TMOD1P28289 359 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 TXKP42681 527 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 CLCN3P51790 818 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 TBC1D8BQ0IIM8 1120 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 CUL4AQ13619 759 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 MTERF2Q49AM1 385 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 EFCAB12Q6NXP0 572 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 ANO5Q75V66 913 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 TMCO2Q7Z6W1 182 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-217ENST00000592391 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 LXNQ9BS40 222 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
DDX39A-217ENST00000592391 RGL1Q9NZL6 768 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 CDH23Q9H251 3354 aa16.29■□□□□ 0.2
DDX39A-217ENST00000592391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-217ENST00000592391 TLL1O43897 1013 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 GJB5O95377 273 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 CA3P07451 260 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 CD52P31358 61 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 ZNF174Q15697 407 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 LRRC71Q8N4P6 559 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 DYDC2Q96IM9 177 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 CDX2Q99626 313 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-217ENST00000592391 EIF2AK1Q9BQI3 630 aaKnown RBP16.28■□□□□ 0.2
DDX39A-217ENST00000592391 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 ZSWIM4Q9H7M6 989 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 WRAP73Q9P2S5 460 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-217ENST00000592391 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
DDX39A-217ENST00000592391 H3BQV1 296 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 SLITRK3O94933 977 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 VTNP04004 478 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 CRYBB1P53674 252 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-217ENST00000592391 CYP4A11Q02928 519 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 PAK2Q13177 524 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 KIZQ2M2Z5 673 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 MCTP1Q6DN14 999 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 NEK9Q8TD19 979 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 RAD9AQ99638 391 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 SH2D3AQ9BRG2 576 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 SUGCTQ9HAC7 445 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 CDHR5Q9HBB8 845 aa16.27■□□□□ 0.2
DDX39A-217ENST00000592391 CYP26B1Q9NR63 512 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms