RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MAGEB6Q8N7X4 407 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 MIGA1Q8NAN2 632 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 KIF1BPQ96EK5 621 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 NOL10Q9BSC4 688 aaKnown RBP9.06□□□□□ -0.96
VMP1-213ENST00000591877 BRINP2Q9C0B6 783 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 OSGEPQ9NPF4 335 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 PI4KBQ9UBF8 816 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 HERC5Q9UII4 1024 aaKnown RBP9.06□□□□□ -0.96
VMP1-213ENST00000591877 PALD1Q9ULE6 856 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 NAV1Q8NEY1 1877 aa9.06□□□□□ -0.96
VMP1-213ENST00000591877 TRIM75PA6NK02 468 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 HMMRO75330 724 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 WISP1O95388 367 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 ARL4DP49703 201 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 SPP2Q13103 211 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 PLEKHG4Q58EX7 1191 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 TREML2Q5T2D2 321 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 GADL1Q6ZQY3 521 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 FASTKD5Q7L8L6 764 aaKnown RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 CLASRPQ8N2M8 674 aaKnown RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 TAB3Q8N5C8 712 aaPredicted RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.05□□□□□ -0.96
VMP1-213ENST00000591877 EDC3Q96F86 508 aaKnown RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 ZNF333Q96JL9 665 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 TM9SF2Q99805 663 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 RIOK1Q9BRS2 568 aaKnown RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 KRTAP4-2Q9BYR5 136 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 DHX36Q9H2U1 1008 aaKnown RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 SAP30BPQ9UHR5 308 aaKnown RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 MAPK8IP1Q9UQF2 711 aa9.05□□□□□ -0.96
VMP1-213ENST00000591877 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
VMP1-213ENST00000591877 BAZ2AQ9UIF9 1905 aaKnown RBP9.04□□□□□ -0.96
VMP1-213ENST00000591877 FAM221BA6H8Z2 402 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 PDPK1O15530 556 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 PSMC4P43686 418 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 PTPN11Q06124 597 aaPredicted RBP9.04□□□□□ -0.96
VMP1-213ENST00000591877 MAP3K12Q12852 859 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 IFRD2Q12894 506 aaPredicted RBP9.04□□□□□ -0.96
VMP1-213ENST00000591877 SLC4A8Q2Y0W8 1093 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 FAM117BQ6P1L5 589 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
VMP1-213ENST00000591877 MAP4K3Q8IVH8 894 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 CELF2-AS1Q8N7Q2 184 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
VMP1-213ENST00000591877 PARK7Q99497 189 aaKnown RBP9.04□□□□□ -0.96
VMP1-213ENST00000591877 NRSN2Q9GZP1 204 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 AGTPBP1Q9UPW5 1226 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 PPME1Q9Y570 386 aa9.04□□□□□ -0.96
VMP1-213ENST00000591877 PLXNB2O15031 1838 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 TCRBV5S4A2TA0A5A2 114 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 GOLIM4O00461 696 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 CHGBP05060 677 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 IFIT2P09913 472 aaKnown RBP9.03□□□□□ -0.96
VMP1-213ENST00000591877 PDE6AP16499 860 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 HMGCS2P54868 508 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 C19orf57Q0VDD7 668 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 KIF22Q14807 665 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 RNF43Q68DV7 783 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 OGFOD2Q6N063 350 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 SH3TC2Q8TF17 1288 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 ZNF669Q96BR6 464 aaPredicted RBP9.03□□□□□ -0.96
VMP1-213ENST00000591877 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
VMP1-213ENST00000591877 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 ZNF532Q9HCE3 1301 aa9.03□□□□□ -0.96
VMP1-213ENST00000591877 MYH8P13535 1937 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 GFRA2O00451 464 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 ATP5JP18859 108 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 EN2P19622 333 aaPredicted RBP9.02□□□□□ -0.97
VMP1-213ENST00000591877 PLCD1P51178 756 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 PRMT2P55345 433 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 GSTM4Q03013 218 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 TTF1Q15361 905 aaPredicted RBP9.02□□□□□ -0.97
VMP1-213ENST00000591877 SLC9C1Q4G0N8 1177 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 HP1BP3Q5SSJ5 553 aaPredicted RBP9.02□□□□□ -0.97
VMP1-213ENST00000591877 RNF187Q5TA31 235 aaPredicted RBP9.02□□□□□ -0.97
VMP1-213ENST00000591877 SLC9C2Q5TAH2 1124 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 TATDN1Q6P1N9 297 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 TMED8Q6PL24 325 aaPredicted RBP9.02□□□□□ -0.97
VMP1-213ENST00000591877 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 CORO1BQ9BR76 489 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 CEP41Q9BYV8 373 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 BOLA2Q9H3K6 86 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 GABRQQ9UN88 632 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 SLC12A7Q9Y666 1083 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 BRCA2P51587 3418 aa9.02□□□□□ -0.97
VMP1-213ENST00000591877 LINC01387J3KSC0 135 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 HLA-DOAP06340 250 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 ASNSP08243 561 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 ADD2P35612 726 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 BACE1P56817 501 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 PRKCZQ05513 592 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 HDXQ7Z353 690 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 CERS3Q8IU89 383 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms