RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 KCTD16Q68DU8 428 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
PDE4A-207ENST00000590407 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 ZNF473Q8WTR7 871 aaKnown RBP13.51□□□□□ -0.25
PDE4A-207ENST00000590407 GJA10Q969M2 543 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 SLC35C1Q96A29 364 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 LENG9Q96B70 501 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 HES6Q96HZ4 224 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 REEP2Q9BRK0 252 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 YY1AP1Q9H869 796 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 SLC12A6Q9UHW9 1150 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 PCDHA1Q9Y5I3 950 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 ASTN1O14525 1302 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 UBE4BO95155 1302 aa13.51□□□□□ -0.25
PDE4A-207ENST00000590407 AKAP3O75969 853 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 NR3C1P04150 777 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 GUCY2CP25092 1073 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 SLC16A2P36021 539 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 LIG3P49916 1009 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 ATP1A2P50993 1020 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
PDE4A-207ENST00000590407 PICALMQ13492 652 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 C6orf89Q6UWU4 347 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 NT5DC3Q86UY8 548 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 KLHL7Q8IXQ5 586 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 SP8Q8IXZ3 490 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 OLIG1Q8TAK6 271 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 MYCBPAPQ8TBZ2 947 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 CCT8L2Q96SF2 557 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L15C9J2P7 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L13C9JLJ4 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L11C9JVI0 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L18D6R9N7 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L22D6RA61 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L17D6RBQ6 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L19D6RCP7 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L20D6RJB6 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
PDE4A-207ENST00000590407 DDX3XO00571 662 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDE4A-207ENST00000590407 EYA4O95677 639 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 CYP3A4P08684 503 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 LMNB1P20700 586 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 STAT3P40763 770 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 STAT1P42224 750 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 GTF2IP78347 998 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 POU5F1Q01860 360 aaKnown RBP13.5□□□□□ -0.25
PDE4A-207ENST00000590407 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 ZNF844Q08AG5 666 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L24Q0WX57 530 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 HLTFQ14527 1009 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 IPO4Q8TEX9 1081 aaKnown RBP13.5□□□□□ -0.25
PDE4A-207ENST00000590407 KAT2BQ92831 832 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 SYT11Q9BT88 431 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
PDE4A-207ENST00000590407 KRIT1O00522 736 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 TMEM253P0C7T8 217 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 MUTP22033 750 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 EIF3BP55884 814 aaKnown RBP13.49□□□□□ -0.25
PDE4A-207ENST00000590407 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
PDE4A-207ENST00000590407 TRADDQ15628 312 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 TTC19Q6DKK2 380 aaPredicted RBP13.49□□□□□ -0.25
PDE4A-207ENST00000590407 RFFLQ8WZ73 363 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 MRIQ9BWK5 157 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 VAV3Q9UKW4 847 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
PDE4A-207ENST00000590407 C5orf60A6NFR6 353 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 TRIM37O94972 964 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 SERPINB2P05120 415 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 SOX5P35711 763 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 DNA2P51530 1060 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 GTF2A1P52655 376 aaPredicted RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 HADHBP55084 474 aaKnown RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PPATQ06203 517 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
PDE4A-207ENST00000590407 AMNQ9BXJ7 453 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 STK33Q9BYT3 514 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 GCNT4Q9P109 453 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 SEL1LQ9UBV2 794 aa13.48□□□□□ -0.25
PDE4A-207ENST00000590407 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms