RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 EVPLQ92817 2033 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 IKBKEQ14164 716 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 PHOSPHO2Q8TCD6 241 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 MTMR9Q96QG7 549 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 SH2D3AQ9BRG2 576 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 ZNF576Q9H609 170 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 TCEAL9Q9UHQ7 104 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 PCDHA11Q9Y5I1 949 aa20.53■□□□□ 0.88
DDX39A-212ENST00000590260 LCHNA4D1U4 455 aa20.52■□□□□ 0.88
DDX39A-212ENST00000590260 RAB30Q15771 203 aa20.52■□□□□ 0.88
DDX39A-212ENST00000590260 LINC01599Q8WXQ3 324 aa20.52■□□□□ 0.88
DDX39A-212ENST00000590260 TNPO1Q92973 898 aaKnown RBP20.52■□□□□ 0.88
DDX39A-212ENST00000590260 NAP1L4Q99733 375 aaKnown RBP20.52■□□□□ 0.88
DDX39A-212ENST00000590260 FOXP1Q9H334 677 aaPredicted RBP20.52■□□□□ 0.88
DDX39A-212ENST00000590260 TRPV2Q9Y5S1 764 aa20.52■□□□□ 0.88
DDX39A-212ENST00000590260 KDM3AQ9Y4C1 1321 aa20.52■□□□□ 0.87
DDX39A-212ENST00000590260 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 CA3P07451 260 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 CLCN3P51790 818 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 ANO5Q75V66 913 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 RSPH3Q86UC2 560 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 IL27Q8NEV9 243 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 TMEM40Q8WWA1 233 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 SEPT8Q92599 483 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 FAM167AQ96KS9 214 aa20.51■□□□□ 0.87
DDX39A-212ENST00000590260 NIFKQ9BYG3 293 aaKnown RBP20.51■□□□□ 0.87
DDX39A-212ENST00000590260 IFIH1Q9BYX4 1025 aaKnown RBP20.51■□□□□ 0.87
DDX39A-212ENST00000590260 CELF4Q9BZC1 486 aaKnown RBP20.51■□□□□ 0.87
DDX39A-212ENST00000590260 EYSQ5T1H1 3165 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 U2AF2P26368 475 aaKnown RBP eCLIP20.5■□□□□ 0.874e-9■□□□□ 9.1
DDX39A-212ENST00000590260 GJB2P29033 226 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 CD52P31358 61 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 KCNJ6P48051 423 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 TOB1P50616 345 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-212ENST00000590260 DRP2Q13474 957 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 NBR1Q14596 966 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 RTN4RL1Q86UN2 441 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-212ENST00000590260 LRRC71Q8N4P6 559 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 ZNF579Q8NAF0 562 aaKnown RBP20.5■□□□□ 0.87
DDX39A-212ENST00000590260 RGL1Q9NZL6 768 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 MSRAQ9UJ68 235 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 ARID2Q68CP9 1835 aa20.5■□□□□ 0.87
DDX39A-212ENST00000590260 ZBTB39O15060 712 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 NEMFO60524 1076 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 GPR32O75388 356 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 GJB5O95377 273 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 VTNP04004 478 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 MCM7P33993 719 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 MCM2P49736 904 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 CUL4AQ13619 759 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 EPHA7Q15375 998 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 SAFBQ15424 915 aaKnown RBP eCLIP20.49■□□□□ 0.87
DDX39A-212ENST00000590260 CALCRLQ16602 461 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 XKR3Q5GH77 459 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 PLA2G4FQ68DD2 849 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 TSHZ1Q6ZSZ6 1077 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 NOSTRINQ8IVI9 506 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 NME8Q8N427 588 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 C4orf32Q8N8J7 132 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 DYDC2Q96IM9 177 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 PPP1R16BQ96T49 567 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 NRBP2Q9NSY0 501 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 STXBP5LQ9Y2K9 1186 aa20.49■□□□□ 0.87
DDX39A-212ENST00000590260 IGKV6-21A0A0C4DH24 114 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 PSMC5P62195 406 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 TAP1Q03518 808 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 ZNF174Q15697 407 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 MTERF2Q49AM1 385 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 IER5Q5VY09 327 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 EFCAB12Q6NXP0 572 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 FAM117BQ6P1L5 589 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 SLFN12Q8IYM2 578 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 TMX1Q9H3N1 280 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 SEPT9Q9UHD8 586 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-212ENST00000590260 CEP131Q9UPN4 1083 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 NOC2LQ9Y3T9 749 aaKnown RBP20.48■□□□□ 0.87
DDX39A-212ENST00000590260 SQORQ9Y6N5 450 aa20.48■□□□□ 0.87
DDX39A-212ENST00000590260 EPOPA6NHQ4 379 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 EFCAB14O75071 495 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 SLITRK3O94933 977 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 RPLP2P05387 115 aaKnown RBP20.47■□□□□ 0.87
DDX39A-212ENST00000590260 TXKP42681 527 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 QARSP47897 775 aaKnown RBP20.47■□□□□ 0.87
DDX39A-212ENST00000590260 TMEM266Q2M3C6 531 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 METTL13Q8N6R0 699 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 APBB2Q92870 758 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 ADAMTS10Q9H324 1103 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 TTC12Q9H892 705 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-212ENST00000590260 PADI3Q9ULW8 664 aa20.47■□□□□ 0.87
DDX39A-212ENST00000590260 POTEMA6NI47 508 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 ENPP3O14638 875 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 MAGEB2O15479 319 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 P4HBP07237 508 aaKnown RBP20.46■□□□□ 0.87
DDX39A-212ENST00000590260 NPEPPSP55786 919 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms