RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 VTA1Q9NP79 307 aa8.22□□□□□ -1.09
SMAD4-210ENST00000590061 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
SMAD4-210ENST00000590061 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
SMAD4-210ENST00000590061 PCDHA7Q9UN72 937 aa8.22□□□□□ -1.09
SMAD4-210ENST00000590061 MYH15Q9Y2K3 1946 aa8.22□□□□□ -1.09
SMAD4-210ENST00000590061 SYNGAP1Q96PV0 1343 aa8.22□□□□□ -1.09
SMAD4-210ENST00000590061 A0A0G2JMZ2 1700 aa8.21□□□□□ -1.09
SMAD4-210ENST00000590061 RBBP6Q7Z6E9 1792 aaKnown RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 VWA3AA6NCI4 1184 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 SPATA31C2B4DYI2 1134 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 IPO5O00410 1097 aaKnown RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 TNPO2O14787 897 aaKnown RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 CNMDO75829 334 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 SMC2O95347 1197 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 IL2RAP01589 272 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 XRCC6P12956 609 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 RHOQP17081 205 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 ICAM3P32942 547 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 ALDH5A1P51649 535 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 GRB14Q14449 540 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 CCDC183Q5T5S1 534 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 LRCH2Q5VUJ6 765 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 RESP18Q5W5W9 173 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 CYP4F22Q6NT55 531 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 ZNF746Q6NUN9 644 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 FAM173BQ6P4H8 233 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 MAMDC4Q6UXC1 1216 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 PRICKLE2Q7Z3G6 844 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 IGSF22Q8N9C0 903 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 FSIP1Q8NA03 581 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 MORC4Q8TE76 937 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 SCFD2Q8WU76 684 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 ERO1AQ96HE7 468 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 INPP4AQ96PE3 977 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 COL25A1Q9BXS0 654 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 KCNMB3Q9NPA1 279 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 TMEM260Q9NX78 707 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 FBXO2Q9UK22 296 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 PPME1Q9Y570 386 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 RIPK3Q9Y572 518 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 UBIAD1Q9Y5Z9 338 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 COL11A1P12107 1806 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-210ENST00000590061 NFASCO94856 1347 aa8.21□□□□□ -1.1
SMAD4-210ENST00000590061 WDR64B1ANS9 1081 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 IGF2BP3O00425 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SLFN14P0C7P3 912 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 MYCLP12524 364 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 CAPN2P17655 700 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 EIF2AK2P19525 551 aaKnown RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SCP2P22307 547 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 EDNRBP24530 442 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 ADORA2AP29274 412 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 MARCKSP29966 332 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 ABCD1P33897 745 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 PPP1R2P41236 205 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 TXKP42681 527 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SLC26A2P50443 739 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SP3Q02447 781 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 CRHR2Q13324 411 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 PPP2R5CQ13362 524 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 DGKZQ13574 1117 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 TTLL4Q14679 1199 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 CT47A1Q5JQC4 288 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 RRAGBQ5VZM2 374 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 OLFML2BQ68BL8 750 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 IQSEC1Q6DN90 963 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 GPR142Q7Z601 462 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 VWA5B2Q8N398 1253 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 C4orf32Q8N8J7 132 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SHISA4Q96DD7 197 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 TAAR1Q96RJ0 339 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 POLR3CQ9BUI4 534 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 NAT10Q9H0A0 1025 aaKnown RBP8.2□□□□□ -1.1
SMAD4-210ENST00000590061 TXNRD2Q9NNW7 524 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 TUFT1Q9NNX1 390 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 KCNH7Q9NS40 1196 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 RMND1Q9NWS8 449 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 KCND2Q9NZV8 630 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 MYH7BA7E2Y1 1941 aa8.2□□□□□ -1.1
SMAD4-210ENST00000590061 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 IGLV3-22A0A075B6J6 115 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 ZNF202O95125 648 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 TDP2O95551 362 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 RPA1P27694 616 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 STAT6P42226 847 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 TECP42680 631 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 GRM1Q13255 1194 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 EPHA7Q15375 998 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 ZNF792Q3KQV3 632 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 EARS2Q5JPH6 523 aaKnown RBP8.19□□□□□ -1.1
SMAD4-210ENST00000590061 MFSD14CQ5VZR4 134 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 MIS18BP1Q6P0N0 1132 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 SLC30A10Q6XR72 485 aa8.19□□□□□ -1.1
SMAD4-210ENST00000590061 OTUD6AQ7L8S5 288 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms