RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 M0QZ92 97 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 COL9A1P20849 921 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 GNA11P29992 359 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 PAK2Q13177 524 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 CAMK1Q14012 370 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 ZNF484Q5JVG2 852 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 ZNF746Q6NUN9 644 aaPredicted RBP20.43■□□□□ 0.86
H3F3B-209ENST00000589949 UPF3BQ9BZI7 483 aaKnown RBP20.43■□□□□ 0.86
H3F3B-209ENST00000589949 TBC1D22BQ9NU19 505 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 GINS2Q9Y248 185 aa20.43■□□□□ 0.86
H3F3B-209ENST00000589949 H3BQ06 376 aaPredicted RBP20.42■□□□□ 0.86
H3F3B-209ENST00000589949 MSH4O15457 936 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 ZNF862O60290 1169 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 IL9P15248 144 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 SETQ01105 290 aaPredicted RBP20.42■□□□□ 0.86
H3F3B-209ENST00000589949 AKAP17AQ02040 695 aaKnown RBP20.42■□□□□ 0.86
H3F3B-209ENST00000589949 NPY5RQ15761 445 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 TIGD5Q53EQ6 642 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 MCTP2Q6DN12 878 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 NPAS4Q8IUM7 802 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 NEK9Q8TD19 979 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 AIFM3Q96NN9 605 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 FTHL17Q9BXU8 183 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 ALG13Q9NP73 1137 aaKnown RBP20.42■□□□□ 0.86
H3F3B-209ENST00000589949 GABBR1Q9UBS5 961 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 EVPLQ92817 2033 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 COL1A2P08123 1366 aa20.42■□□□□ 0.86
H3F3B-209ENST00000589949 DTNBO60941 627 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 CSPG5O95196 566 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 VTNP04004 478 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 RB1P06400 928 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 DNAJB1P25685 340 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 LTBRP36941 435 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 NFX1Q12986 1120 aaKnown RBP20.41■□□□□ 0.86
H3F3B-209ENST00000589949 UGCGQ16739 394 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 KIZQ2M2Z5 673 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 PAN2Q504Q3 1202 aaKnown RBP20.41■□□□□ 0.86
H3F3B-209ENST00000589949 CKAP2LQ8IYA6 745 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 C11orf84Q9BUA3 381 aaPredicted RBP20.41■□□□□ 0.86
H3F3B-209ENST00000589949 NSUN3Q9H649 340 aaKnown RBP20.41■□□□□ 0.86
H3F3B-209ENST00000589949 PCDHA10Q9Y5I2 948 aa20.41■□□□□ 0.86
H3F3B-209ENST00000589949 M0R2N6 131 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 GPR32O75388 356 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 PSAPP07602 524 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 GTF2F1P35269 517 aaKnown RBP eCLIP20.4■□□□□ 0.86
H3F3B-209ENST00000589949 SMAP1Q8IYB5 467 aaPredicted RBP20.4■□□□□ 0.86
H3F3B-209ENST00000589949 CMTR2Q8IYT2 770 aaKnown RBP20.4■□□□□ 0.86
H3F3B-209ENST00000589949 CCDC148Q8NFR7 591 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 BICD2Q8TD16 824 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 BBXQ8WY36 941 aaPredicted RBP20.4■□□□□ 0.86
H3F3B-209ENST00000589949 PABPC5Q96DU9 382 aaKnown RBP20.4■□□□□ 0.86
H3F3B-209ENST00000589949 KIAA1671Q9BY89 1806 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 SH3GLB2Q9NR46 395 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 PLAGL2Q9UPG8 496 aa20.4■□□□□ 0.86
H3F3B-209ENST00000589949 GRXCR2A6NFK2 248 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 IBSPP21815 317 aaPredicted RBP20.39■□□□□ 0.85
H3F3B-209ENST00000589949 CLCN3P51790 818 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 NLRP5P59047 1200 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 DLX2Q07687 328 aaPredicted RBP20.39■□□□□ 0.85
H3F3B-209ENST00000589949 HYAL1Q12794 435 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 PTCRAQ6ISU1 281 aaPredicted RBP20.39■□□□□ 0.85
H3F3B-209ENST00000589949 FAM228AQ86W67 206 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 FAM178BQ8IXR5 827 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 LINC01465Q8N7H1 131 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 TBCKQ8TEA7 893 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 SLC5A5Q92911 643 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 OSMRQ99650 979 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 HCSTQ9UBK5 93 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 ST3GAL5Q9UNP4 418 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 CYP46A1Q9Y6A2 500 aa20.39■□□□□ 0.85
H3F3B-209ENST00000589949 WDR81Q562E7 1941 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 EPB41L2O43491 1005 aaKnown RBP20.38■□□□□ 0.85
H3F3B-209ENST00000589949 RPS6KA5O75582 802 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 ITGB1P05556 798 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 SARSP49591 514 aaKnown RBP20.38■□□□□ 0.85
H3F3B-209ENST00000589949 USP11P51784 963 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 STK3Q13188 491 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 CTC1Q2NKJ3 1217 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 METTL13Q8N6R0 699 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 ZNF274Q96GC6 653 aaPredicted RBP20.38■□□□□ 0.85
H3F3B-209ENST00000589949 ADAM2Q99965 735 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 PLVAPQ9BX97 442 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 TM6SF1Q9BZW5 370 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 LMAN2LQ9H0V9 348 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 UNC45AQ9H3U1 944 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 C11orf16Q9NQ32 467 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 DISC1Q9NRI5 854 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 RWDD3Q9Y3V2 267 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 SAMM50Q9Y512 469 aa20.38■□□□□ 0.85
H3F3B-209ENST00000589949 MYH9P35579 1960 aaKnown RBP20.37■□□□□ 0.85
H3F3B-209ENST00000589949 C5orf42Q9H799 3197 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 C9IYK1 514 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 CHMP2AO43633 222 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 TDP2O95551 362 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 MMP1P03956 469 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 CRYBB1P53674 252 aaPredicted RBP20.37■□□□□ 0.85
H3F3B-209ENST00000589949 SSRP1Q08945 709 aaKnown RBP20.37■□□□□ 0.85
H3F3B-209ENST00000589949 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 EP400NLQ6ZTU2 488 aa20.37■□□□□ 0.85
H3F3B-209ENST00000589949 LRRC71Q8N4P6 559 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms