RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 MRPS6P82932 125 aaKnown RBP9.41□□□□□ -0.9
TPM4-211ENST00000589897 KRT76Q01546 638 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 TOB2Q14106 344 aaPredicted RBP9.41□□□□□ -0.9
TPM4-211ENST00000589897 PLCB4Q15147 1175 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 ANKRD1Q15327 319 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 SMAD2Q15796 467 aaKnown RBP9.41□□□□□ -0.9
TPM4-211ENST00000589897 NTRK3Q16288 839 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 TCTN1Q2MV58 587 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 FAM26DQ5JW98 314 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 SWSAP1Q6NVH7 229 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 TRMT1LQ7Z2T5 733 aaKnown RBP9.41□□□□□ -0.9
TPM4-211ENST00000589897 SPRED2Q7Z698 418 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 RASGRP4Q8TDF6 673 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 CDY2AQ9Y6F7 541 aa9.41□□□□□ -0.9
TPM4-211ENST00000589897 MBLAC1A4D2B0 266 aaPredicted RBP9.4□□□□□ -0.9
TPM4-211ENST00000589897 ATG7O95352 703 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 USP11P51784 963 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 TMEM62Q0P6H9 643 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 COL19A1Q14993 1142 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 MARCH8Q5T0T0 291 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 GALNT17Q6IS24 598 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 ZNF746Q6NUN9 644 aaPredicted RBP9.4□□□□□ -0.9
TPM4-211ENST00000589897 ABHD15Q6UXT9 468 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 RPAINQ86UA6 219 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 SMAP1Q8IYB5 467 aaPredicted RBP9.4□□□□□ -0.9
TPM4-211ENST00000589897 NME8Q8N427 588 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 TRAPPC12Q8WVT3 735 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 PCYT2Q99447 389 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 NSUN3Q9H649 340 aaKnown RBP9.4□□□□□ -0.9
TPM4-211ENST00000589897 CLDND1Q9NY35 253 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 PCDHA4Q9UN74 947 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 GINS2Q9Y248 185 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 PCDHA2Q9Y5H9 948 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
TPM4-211ENST00000589897 CHD9Q3L8U1 2897 aa9.4□□□□□ -0.91
TPM4-211ENST00000589897 IGLV3-22A0A075B6J6 115 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 SMIM35A0A1B0GVV1 85 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 H3BNC9 293 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 MARCH6O60337 910 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 GAS7O60861 476 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 CCNE2O96020 404 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 KLRC1P26715 233 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 AVPR2P30518 371 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 ANAPC15P60006 121 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 PAK2Q13177 524 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 LPIN1Q14693 890 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 TCEAL5Q5H9L2 206 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 ZNF484Q5JVG2 852 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 FBXO47Q5MNV8 452 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 ODR4Q5SWX8 454 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 MTHFD1LQ6UB35 978 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 TSHZ1Q6ZSZ6 1077 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 CCDC60Q8IWA6 550 aaPredicted RBP9.39□□□□□ -0.91
TPM4-211ENST00000589897 BLIDQ8IZY5 108 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 METTL13Q8N6R0 699 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 ATP8B4Q8TF62 1192 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 TOP1MTQ969P6 601 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 ZBTB10Q96DT7 871 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 IL17RAQ96F46 866 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 NRBP2Q9NSY0 501 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 CEP131Q9UPN4 1083 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 TRPV2Q9Y5S1 764 aa9.39□□□□□ -0.91
TPM4-211ENST00000589897 COL1A2P08123 1366 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 EVPLQ92817 2033 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 CCDC194A0A1B0GVG4 234 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 ADAMTS3O15072 1205 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 DHX15O43143 795 aaKnown RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 CHMP2AO43633 222 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 IBSPP21815 317 aaPredicted RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 TMOD1P28289 359 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 CD52P31358 61 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 CIITAP33076 1130 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 HTRA4P83105 476 aaPredicted RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 ZXDAP98168 799 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 MGAT3Q09327 533 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 NFX1Q12986 1120 aaKnown RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 GPM6BQ13491 265 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
TPM4-211ENST00000589897 EPC2Q52LR7 807 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 LRCH2Q5VUJ6 765 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 FAM177A1Q8N128 213 aaPredicted RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 FIBCD1Q8N539 461 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 CRYGNQ8WXF5 182 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 WASF1Q92558 559 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 FAM167AQ96KS9 214 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 FTHL17Q9BXU8 183 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 CELF4Q9BZC1 486 aaKnown RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 OSBPL7Q9BZF2 842 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 BRMS1Q9HCU9 246 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 GABBR1Q9UBS5 961 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 SQORQ9Y6N5 450 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms